Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Vps4bP46467 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Vps4bP46467 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps4bP46467 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Vps4bP46467 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vps4bP46467 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Vps4bP46467 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps4bP46467 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Vps4bP46467 Matn2-206ENSMUST00000228570 2798 ntBASIC14□□□□□ -0.17
Vps4bP46467 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps4bP46467 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps4bP46467 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps4bP46467 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps4bP46467 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.99□□□□□ -0.17
Vps4bP46467 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps4bP46467 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps4bP46467 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Vps4bP46467 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.99□□□□□ -0.17
Vps4bP46467 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Vps4bP46467 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vps4bP46467 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vps4bP46467 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps4bP46467 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps4bP46467 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps4bP46467 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vps4bP46467 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Vps4bP46467 Gm5745-201ENSMUST00000183748 313 ntBASIC13.99□□□□□ -0.17
Vps4bP46467 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vps4bP46467 Gm16476-201ENSMUST00000221544 139 ntBASIC13.99□□□□□ -0.17
Vps4bP46467 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.99□□□□□ -0.17
Vps4bP46467 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Vps4bP46467 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Vps4bP46467 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Vps4bP46467 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps4bP46467 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps4bP46467 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Vps4bP46467 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Vps4bP46467 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Vps4bP46467 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Vps4bP46467 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps4bP46467 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps4bP46467 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Vps4bP46467 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps4bP46467 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps4bP46467 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps4bP46467 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.98□□□□□ -0.17
Vps4bP46467 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vps4bP46467 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps4bP46467 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps4bP46467 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Vps4bP46467 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.98□□□□□ -0.17
Vps4bP46467 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.98□□□□□ -0.17
Vps4bP46467 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vps4bP46467 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vps4bP46467 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.98□□□□□ -0.17
Vps4bP46467 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.98□□□□□ -0.17
Vps4bP46467 Gm10253-201ENSMUST00000194270 940 ntBASIC13.98□□□□□ -0.17
Vps4bP46467 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vps4bP46467 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.98□□□□□ -0.17
Vps4bP46467 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps4bP46467 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps4bP46467 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps4bP46467 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vps4bP46467 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vps4bP46467 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps4bP46467 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps4bP46467 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vps4bP46467 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps4bP46467 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps4bP46467 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4bP46467 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4bP46467 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4bP46467 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4bP46467 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4bP46467 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4bP46467 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4bP46467 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.97□□□□□ -0.17
Vps4bP46467 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4bP46467 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Vps4bP46467 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4bP46467 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4bP46467 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Vps4bP46467 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4bP46467 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4bP46467 Gm24543-201ENSMUST00000103867 82 ntBASIC13.97□□□□□ -0.17
Vps4bP46467 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.97□□□□□ -0.17
Vps4bP46467 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Vps4bP46467 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4bP46467 Gm43438-201ENSMUST00000198133 379 ntBASIC13.97□□□□□ -0.17
Vps4bP46467 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.97□□□□□ -0.17
Vps4bP46467 Gm6916-202ENSMUST00000205523 195 ntBASIC13.97□□□□□ -0.17
Vps4bP46467 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Vps4bP46467 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4bP46467 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Vps4bP46467 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4bP46467 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4bP46467 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Vps4bP46467 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4bP46467 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4bP46467 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms