Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cd27P41272 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cd27P41272 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cd27P41272 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cd27P41272 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.05□□□□□ -0.64
Cd27P41272 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.05□□□□□ -0.64
Cd27P41272 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.05□□□□□ -0.64
Cd27P41272 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.05□□□□□ -0.64
Cd27P41272 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
Cd27P41272 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cd27P41272 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd27P41272 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cd27P41272 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.04□□□□□ -0.64
Cd27P41272 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Cd27P41272 Gm45605-201ENSMUST00000210265 4269 ntBASIC11.04□□□□□ -0.64
Cd27P41272 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd27P41272 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cd27P41272 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd27P41272 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd27P41272 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cd27P41272 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cd27P41272 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cd27P41272 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cd27P41272 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd27P41272 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd27P41272 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Cd27P41272 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.04□□□□□ -0.64
Cd27P41272 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd27P41272 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cd27P41272 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Cd27P41272 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.04□□□□□ -0.64
Cd27P41272 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.04□□□□□ -0.64
Cd27P41272 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cd27P41272 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.04□□□□□ -0.64
Cd27P41272 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cd27P41272 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Cd27P41272 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Cd27P41272 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.04□□□□□ -0.64
Cd27P41272 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.04□□□□□ -0.64
Cd27P41272 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.04□□□□□ -0.64
Cd27P41272 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.04□□□□□ -0.64
Cd27P41272 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd27P41272 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd27P41272 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Cd27P41272 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd27P41272 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cd27P41272 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cd27P41272 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd27P41272 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd27P41272 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd27P41272 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd27P41272 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cd27P41272 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd27P41272 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd27P41272 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cd27P41272 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cd27P41272 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cd27P41272 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Cd27P41272 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cd27P41272 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd27P41272 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Cd27P41272 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cd27P41272 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cd27P41272 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd27P41272 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.03□□□□□ -0.64
Cd27P41272 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cd27P41272 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd27P41272 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd27P41272 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.03□□□□□ -0.64
Cd27P41272 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.03□□□□□ -0.64
Cd27P41272 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd27P41272 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.03□□□□□ -0.64
Cd27P41272 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.03□□□□□ -0.64
Cd27P41272 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd27P41272 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.03□□□□□ -0.64
Cd27P41272 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cd27P41272 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cd27P41272 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd27P41272 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cd27P41272 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.03□□□□□ -0.64
Cd27P41272 Gm5279-201ENSMUST00000199575 745 ntBASIC11.03□□□□□ -0.64
Cd27P41272 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.03□□□□□ -0.64
Cd27P41272 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.03□□□□□ -0.64
Cd27P41272 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.03□□□□□ -0.64
Cd27P41272 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.03□□□□□ -0.64
Cd27P41272 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Cd27P41272 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd27P41272 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Cd27P41272 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.03□□□□□ -0.64
Cd27P41272 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Cd27P41272 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.03□□□□□ -0.64
Cd27P41272 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd27P41272 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd27P41272 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cd27P41272 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cd27P41272 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd27P41272 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.03□□□□□ -0.64
Cd27P41272 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.03□□□□□ -0.64
Cd27P41272 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cd27P41272 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms