Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfc1P35601 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfc1P35601 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.52□□□□□ -0.08
Rfc1P35601 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfc1P35601 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfc1P35601 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfc1P35601 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfc1P35601 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Rfc1P35601 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC14.52□□□□□ -0.09
Rfc1P35601 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.52□□□□□ -0.09
Rfc1P35601 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.52□□□□□ -0.09
Rfc1P35601 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Rfc1P35601 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.52□□□□□ -0.09
Rfc1P35601 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.52□□□□□ -0.09
Rfc1P35601 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.52□□□□□ -0.09
Rfc1P35601 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rfc1P35601 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.52□□□□□ -0.09
Rfc1P35601 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rfc1P35601 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Rfc1P35601 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Rfc1P35601 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.52□□□□□ -0.09
Rfc1P35601 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rfc1P35601 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.52□□□□□ -0.09
Rfc1P35601 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rfc1P35601 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rfc1P35601 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rfc1P35601 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rfc1P35601 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rfc1P35601 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rfc1P35601 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfc1P35601 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfc1P35601 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rfc1P35601 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rfc1P35601 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfc1P35601 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.51□□□□□ -0.09
Rfc1P35601 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfc1P35601 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rfc1P35601 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfc1P35601 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfc1P35601 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC14.51□□□□□ -0.09
Rfc1P35601 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfc1P35601 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rfc1P35601 Gm43463-201ENSMUST00000195967 1803 ntBASIC14.51□□□□□ -0.09
Rfc1P35601 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Rfc1P35601 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfc1P35601 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfc1P35601 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rfc1P35601 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.51□□□□□ -0.09
Rfc1P35601 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.51□□□□□ -0.09
Rfc1P35601 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfc1P35601 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfc1P35601 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfc1P35601 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfc1P35601 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rfc1P35601 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfc1P35601 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfc1P35601 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfc1P35601 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfc1P35601 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Rfc1P35601 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Rfc1P35601 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfc1P35601 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rfc1P35601 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfc1P35601 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Rfc1P35601 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.51□□□□□ -0.09
Rfc1P35601 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfc1P35601 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfc1P35601 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfc1P35601 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfc1P35601 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfc1P35601 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfc1P35601 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfc1P35601 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Rfc1P35601 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfc1P35601 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Rfc1P35601 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfc1P35601 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rfc1P35601 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rfc1P35601 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Rfc1P35601 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rfc1P35601 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfc1P35601 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Rfc1P35601 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfc1P35601 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfc1P35601 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.5□□□□□ -0.09
Rfc1P35601 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfc1P35601 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfc1P35601 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfc1P35601 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfc1P35601 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfc1P35601 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfc1P35601 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.5□□□□□ -0.09
Rfc1P35601 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rfc1P35601 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfc1P35601 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.49□□□□□ -0.09
Rfc1P35601 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfc1P35601 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfc1P35601 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rfc1P35601 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.49□□□□□ -0.09
Rfc1P35601 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms