Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
PdgfbP31240 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PdgfbP31240 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
PdgfbP31240 Gm15770-201ENSMUST00000117498 584 ntBASIC13.71□□□□□ -0.21
PdgfbP31240 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PdgfbP31240 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
PdgfbP31240 Mospd4-201ENSMUST00000180618 576 ntBASIC13.71□□□□□ -0.21
PdgfbP31240 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.71□□□□□ -0.21
PdgfbP31240 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.71□□□□□ -0.21
PdgfbP31240 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PdgfbP31240 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PdgfbP31240 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PdgfbP31240 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PdgfbP31240 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.71□□□□□ -0.21
PdgfbP31240 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PdgfbP31240 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PdgfbP31240 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
PdgfbP31240 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
PdgfbP31240 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PdgfbP31240 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PdgfbP31240 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PdgfbP31240 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.71□□□□□ -0.22
PdgfbP31240 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
PdgfbP31240 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
PdgfbP31240 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
PdgfbP31240 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PdgfbP31240 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PdgfbP31240 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PdgfbP31240 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.7□□□□□ -0.22
PdgfbP31240 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PdgfbP31240 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PdgfbP31240 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PdgfbP31240 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PdgfbP31240 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PdgfbP31240 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PdgfbP31240 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.7□□□□□ -0.22
PdgfbP31240 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
PdgfbP31240 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PdgfbP31240 Gm8805-201ENSMUST00000117848 313 ntBASIC13.7□□□□□ -0.22
PdgfbP31240 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.7□□□□□ -0.22
PdgfbP31240 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.7□□□□□ -0.22
PdgfbP31240 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PdgfbP31240 Mir6979-201ENSMUST00000183927 56 ntBASIC13.7□□□□□ -0.22
PdgfbP31240 Gm9445-201ENSMUST00000207454 1285 ntBASIC13.7□□□□□ -0.22
PdgfbP31240 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.7□□□□□ -0.22
PdgfbP31240 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.7□□□□□ -0.22
PdgfbP31240 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.7□□□□□ -0.22
PdgfbP31240 Gm7293-201ENSMUST00000216682 1007 ntBASIC13.7□□□□□ -0.22
PdgfbP31240 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
PdgfbP31240 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.7□□□□□ -0.22
PdgfbP31240 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PdgfbP31240 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PdgfbP31240 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
PdgfbP31240 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
PdgfbP31240 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PdgfbP31240 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PdgfbP31240 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
PdgfbP31240 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
PdgfbP31240 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PdgfbP31240 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PdgfbP31240 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PdgfbP31240 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PdgfbP31240 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PdgfbP31240 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PdgfbP31240 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.7□□□□□ -0.22
PdgfbP31240 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PdgfbP31240 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.7□□□□□ -0.22
PdgfbP31240 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.7□□□□□ -0.22
PdgfbP31240 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PdgfbP31240 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PdgfbP31240 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.7□□□□□ -0.22
PdgfbP31240 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PdgfbP31240 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PdgfbP31240 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
PdgfbP31240 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
PdgfbP31240 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PdgfbP31240 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PdgfbP31240 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PdgfbP31240 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
PdgfbP31240 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.69□□□□□ -0.22
PdgfbP31240 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PdgfbP31240 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PdgfbP31240 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PdgfbP31240 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
PdgfbP31240 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC13.69□□□□□ -0.22
PdgfbP31240 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PdgfbP31240 B9d1os-201ENSMUST00000137010 674 ntBASIC13.69□□□□□ -0.22
PdgfbP31240 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PdgfbP31240 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PdgfbP31240 Gm3890-201ENSMUST00000182416 207 ntBASIC13.69□□□□□ -0.22
PdgfbP31240 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.69□□□□□ -0.22
PdgfbP31240 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.69□□□□□ -0.22
PdgfbP31240 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PdgfbP31240 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.69□□□□□ -0.22
PdgfbP31240 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
PdgfbP31240 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.69□□□□□ -0.22
PdgfbP31240 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PdgfbP31240 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PdgfbP31240 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PdgfbP31240 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms