Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nedd8P29595 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.7□□□□□ -0.38
Nedd8P29595 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nedd8P29595 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.7□□□□□ -0.38
Nedd8P29595 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nedd8P29595 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nedd8P29595 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Nedd8P29595 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.7□□□□□ -0.38
Nedd8P29595 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.7□□□□□ -0.38
Nedd8P29595 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nedd8P29595 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.7□□□□□ -0.38
Nedd8P29595 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nedd8P29595 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nedd8P29595 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nedd8P29595 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nedd8P29595 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Nedd8P29595 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nedd8P29595 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.7□□□□□ -0.38
Nedd8P29595 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nedd8P29595 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nedd8P29595 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nedd8P29595 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nedd8P29595 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nedd8P29595 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.69□□□□□ -0.38
Nedd8P29595 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nedd8P29595 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nedd8P29595 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nedd8P29595 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nedd8P29595 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nedd8P29595 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nedd8P29595 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.69□□□□□ -0.38
Nedd8P29595 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nedd8P29595 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nedd8P29595 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nedd8P29595 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.69□□□□□ -0.38
Nedd8P29595 Gm25016-201ENSMUST00000158399 131 ntBASIC12.69□□□□□ -0.38
Nedd8P29595 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nedd8P29595 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.69□□□□□ -0.38
Nedd8P29595 Gm2445-201ENSMUST00000182798 989 ntBASIC12.69□□□□□ -0.38
Nedd8P29595 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.69□□□□□ -0.38
Nedd8P29595 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.69□□□□□ -0.38
Nedd8P29595 Gm45098-201ENSMUST00000207179 657 ntBASIC12.69□□□□□ -0.38
Nedd8P29595 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.69□□□□□ -0.38
Nedd8P29595 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nedd8P29595 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nedd8P29595 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nedd8P29595 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Nedd8P29595 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nedd8P29595 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Nedd8P29595 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nedd8P29595 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nedd8P29595 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nedd8P29595 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nedd8P29595 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nedd8P29595 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nedd8P29595 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Nedd8P29595 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Nedd8P29595 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nedd8P29595 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Nedd8P29595 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nedd8P29595 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.68□□□□□ -0.38
Nedd8P29595 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nedd8P29595 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nedd8P29595 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Nedd8P29595 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Nedd8P29595 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nedd8P29595 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nedd8P29595 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nedd8P29595 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nedd8P29595 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Nedd8P29595 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nedd8P29595 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nedd8P29595 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Nedd8P29595 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nedd8P29595 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nedd8P29595 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.68□□□□□ -0.38
Nedd8P29595 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Nedd8P29595 AC147366.1-201ENSMUST00000227671 852 ntBASIC12.68□□□□□ -0.38
Nedd8P29595 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nedd8P29595 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nedd8P29595 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nedd8P29595 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nedd8P29595 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nedd8P29595 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Nedd8P29595 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nedd8P29595 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.68□□□□□ -0.38
Nedd8P29595 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nedd8P29595 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nedd8P29595 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd8P29595 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd8P29595 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd8P29595 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd8P29595 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd8P29595 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd8P29595 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd8P29595 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd8P29595 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Nedd8P29595 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Nedd8P29595 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd8P29595 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms