Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.75■□□□□ 0.11
Vcam1P29533 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Vcam1P29533 Gm10339-203ENSMUST00000225409 1671 ntBASIC15.75■□□□□ 0.11
Vcam1P29533 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vcam1P29533 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Vcam1P29533 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vcam1P29533 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vcam1P29533 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vcam1P29533 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vcam1P29533 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vcam1P29533 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Vcam1P29533 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.74■□□□□ 0.11
Vcam1P29533 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vcam1P29533 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Vcam1P29533 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vcam1P29533 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vcam1P29533 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vcam1P29533 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Vcam1P29533 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vcam1P29533 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC15.74■□□□□ 0.11
Vcam1P29533 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC15.74■□□□□ 0.11
Vcam1P29533 Gm44064-201ENSMUST00000204964 1087 ntBASIC15.74■□□□□ 0.11
Vcam1P29533 Gm18054-201ENSMUST00000207539 555 ntBASIC15.74■□□□□ 0.11
Vcam1P29533 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vcam1P29533 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vcam1P29533 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vcam1P29533 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vcam1P29533 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vcam1P29533 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vcam1P29533 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vcam1P29533 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.74■□□□□ 0.11
Vcam1P29533 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vcam1P29533 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Vcam1P29533 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Vcam1P29533 Gm18630-201ENSMUST00000222109 1397 ntBASIC15.74■□□□□ 0.11
Vcam1P29533 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vcam1P29533 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vcam1P29533 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vcam1P29533 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vcam1P29533 Gm38197-201ENSMUST00000192320 2122 ntBASIC15.73■□□□□ 0.11
Vcam1P29533 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Vcam1P29533 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vcam1P29533 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vcam1P29533 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Vcam1P29533 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC15.73■□□□□ 0.11
Vcam1P29533 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vcam1P29533 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vcam1P29533 Gm13369-201ENSMUST00000119442 987 ntBASIC15.73■□□□□ 0.11
Vcam1P29533 Gm1335-201ENSMUST00000121653 386 ntBASIC15.73■□□□□ 0.11
Vcam1P29533 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC15.73■□□□□ 0.11
Vcam1P29533 Gm27572-201ENSMUST00000183702 255 ntBASIC15.73■□□□□ 0.11
Vcam1P29533 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vcam1P29533 Gm37497-201ENSMUST00000195830 798 ntBASIC15.73■□□□□ 0.11
Vcam1P29533 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC15.73■□□□□ 0.11
Vcam1P29533 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC15.73■□□□□ 0.11
Vcam1P29533 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vcam1P29533 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vcam1P29533 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vcam1P29533 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vcam1P29533 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vcam1P29533 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vcam1P29533 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vcam1P29533 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Vcam1P29533 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Vcam1P29533 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vcam1P29533 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vcam1P29533 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vcam1P29533 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Vcam1P29533 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vcam1P29533 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vcam1P29533 Abhd6-203ENSMUST00000225234 1958 ntBASIC15.73■□□□□ 0.11
Vcam1P29533 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vcam1P29533 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
Vcam1P29533 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Vcam1P29533 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vcam1P29533 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vcam1P29533 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vcam1P29533 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Vcam1P29533 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Vcam1P29533 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vcam1P29533 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC15.72■□□□□ 0.11
Vcam1P29533 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vcam1P29533 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Vcam1P29533 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vcam1P29533 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vcam1P29533 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vcam1P29533 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vcam1P29533 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC15.72■□□□□ 0.11
Vcam1P29533 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC15.72■□□□□ 0.11
Vcam1P29533 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vcam1P29533 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vcam1P29533 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vcam1P29533 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Vcam1P29533 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Vcam1P29533 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vcam1P29533 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Vcam1P29533 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Vcam1P29533 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC15.72■□□□□ 0.11
Vcam1P29533 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC15.72■□□□□ 0.11
Vcam1P29533 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms