Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Col8a2P25318 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Col8a2P25318 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col8a2P25318 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Col8a2P25318 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col8a2P25318 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC11.5□□□□□ -0.57
Col8a2P25318 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col8a2P25318 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.5□□□□□ -0.57
Col8a2P25318 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col8a2P25318 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col8a2P25318 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col8a2P25318 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col8a2P25318 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col8a2P25318 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col8a2P25318 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col8a2P25318 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col8a2P25318 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Col8a2P25318 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col8a2P25318 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.49□□□□□ -0.57
Col8a2P25318 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col8a2P25318 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col8a2P25318 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col8a2P25318 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col8a2P25318 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col8a2P25318 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col8a2P25318 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col8a2P25318 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col8a2P25318 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col8a2P25318 Gm11918-201ENSMUST00000121660 179 ntBASIC11.49□□□□□ -0.57
Col8a2P25318 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.49□□□□□ -0.57
Col8a2P25318 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col8a2P25318 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col8a2P25318 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Col8a2P25318 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col8a2P25318 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col8a2P25318 Mir7654-201ENSMUST00000185082 70 ntBASIC11.49□□□□□ -0.57
Col8a2P25318 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col8a2P25318 Gm19078-201ENSMUST00000206311 727 ntBASIC11.49□□□□□ -0.57
Col8a2P25318 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.49□□□□□ -0.57
Col8a2P25318 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col8a2P25318 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col8a2P25318 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col8a2P25318 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col8a2P25318 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col8a2P25318 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col8a2P25318 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col8a2P25318 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col8a2P25318 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.49□□□□□ -0.57
Col8a2P25318 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Col8a2P25318 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.49□□□□□ -0.57
Col8a2P25318 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col8a2P25318 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col8a2P25318 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col8a2P25318 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col8a2P25318 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col8a2P25318 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col8a2P25318 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.49□□□□□ -0.57
Col8a2P25318 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Col8a2P25318 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col8a2P25318 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col8a2P25318 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col8a2P25318 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Col8a2P25318 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col8a2P25318 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col8a2P25318 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col8a2P25318 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Col8a2P25318 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col8a2P25318 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col8a2P25318 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Col8a2P25318 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.48□□□□□ -0.57
Col8a2P25318 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col8a2P25318 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col8a2P25318 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Col8a2P25318 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col8a2P25318 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col8a2P25318 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col8a2P25318 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col8a2P25318 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col8a2P25318 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.48□□□□□ -0.57
Col8a2P25318 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col8a2P25318 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col8a2P25318 Gm3809-201ENSMUST00000180973 1006 ntBASIC11.48□□□□□ -0.57
Col8a2P25318 Gm7558-201ENSMUST00000193221 1165 ntBASIC11.48□□□□□ -0.57
Col8a2P25318 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11.48□□□□□ -0.57
Col8a2P25318 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.48□□□□□ -0.57
Col8a2P25318 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.48□□□□□ -0.57
Col8a2P25318 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.48□□□□□ -0.57
Col8a2P25318 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col8a2P25318 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Col8a2P25318 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col8a2P25318 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col8a2P25318 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col8a2P25318 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.48□□□□□ -0.57
Col8a2P25318 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col8a2P25318 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col8a2P25318 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col8a2P25318 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC11.48□□□□□ -0.57
Col8a2P25318 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.48□□□□□ -0.57
Col8a2P25318 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col8a2P25318 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms