Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
BdnfP21237 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.23□□□□□ -0.29
BdnfP21237 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC13.23□□□□□ -0.29
BdnfP21237 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.22□□□□□ -0.29
BdnfP21237 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
BdnfP21237 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
BdnfP21237 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
BdnfP21237 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
BdnfP21237 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
BdnfP21237 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
BdnfP21237 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
BdnfP21237 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
BdnfP21237 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
BdnfP21237 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.22□□□□□ -0.29
BdnfP21237 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.22□□□□□ -0.29
BdnfP21237 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
BdnfP21237 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
BdnfP21237 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
BdnfP21237 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
BdnfP21237 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
BdnfP21237 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
BdnfP21237 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
BdnfP21237 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.22□□□□□ -0.29
BdnfP21237 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
BdnfP21237 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.22□□□□□ -0.29
BdnfP21237 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.22□□□□□ -0.29
BdnfP21237 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.22□□□□□ -0.29
BdnfP21237 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
BdnfP21237 Gm27494-201ENSMUST00000184735 189 ntBASIC13.22□□□□□ -0.29
BdnfP21237 Gm29310-201ENSMUST00000185468 696 ntBASIC13.22□□□□□ -0.29
BdnfP21237 Gm21825-201ENSMUST00000185728 696 ntBASIC13.22□□□□□ -0.29
BdnfP21237 Gm29109-201ENSMUST00000185895 696 ntBASIC13.22□□□□□ -0.29
BdnfP21237 Gm21896-201ENSMUST00000186520 696 ntBASIC13.22□□□□□ -0.29
BdnfP21237 Gm21873-201ENSMUST00000186728 696 ntBASIC13.22□□□□□ -0.29
BdnfP21237 Gm21794-201ENSMUST00000187056 696 ntBASIC13.22□□□□□ -0.29
BdnfP21237 Gm21880-201ENSMUST00000187275 696 ntBASIC13.22□□□□□ -0.29
BdnfP21237 Gm21826-201ENSMUST00000187451 696 ntBASIC13.22□□□□□ -0.29
BdnfP21237 Gm21198-201ENSMUST00000188393 696 ntBASIC13.22□□□□□ -0.29
BdnfP21237 Gm21749-201ENSMUST00000189343 696 ntBASIC13.22□□□□□ -0.29
BdnfP21237 Gm21901-201ENSMUST00000189568 696 ntBASIC13.22□□□□□ -0.29
BdnfP21237 Gm29424-201ENSMUST00000189716 696 ntBASIC13.22□□□□□ -0.29
BdnfP21237 Gm28599-201ENSMUST00000189838 694 ntBASIC13.22□□□□□ -0.29
BdnfP21237 Gm21867-201ENSMUST00000189917 696 ntBASIC13.22□□□□□ -0.29
BdnfP21237 Gm29269-201ENSMUST00000190087 696 ntBASIC13.22□□□□□ -0.29
BdnfP21237 Gm21722-201ENSMUST00000190153 696 ntBASIC13.22□□□□□ -0.29
BdnfP21237 Gm28423-201ENSMUST00000190701 696 ntBASIC13.22□□□□□ -0.29
BdnfP21237 Gm21899-201ENSMUST00000190745 696 ntBASIC13.22□□□□□ -0.29
BdnfP21237 Gm21910-201ENSMUST00000191163 696 ntBASIC13.22□□□□□ -0.29
BdnfP21237 Gm21849-201ENSMUST00000191571 696 ntBASIC13.22□□□□□ -0.29
BdnfP21237 Gm28678-201ENSMUST00000191593 696 ntBASIC13.22□□□□□ -0.29
BdnfP21237 Gm20910-201ENSMUST00000193268 696 ntBASIC13.22□□□□□ -0.29
BdnfP21237 Gm21871-201ENSMUST00000194621 696 ntBASIC13.22□□□□□ -0.29
BdnfP21237 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.22□□□□□ -0.29
BdnfP21237 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
BdnfP21237 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
BdnfP21237 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.22□□□□□ -0.29
BdnfP21237 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
BdnfP21237 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
BdnfP21237 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
BdnfP21237 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
BdnfP21237 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
BdnfP21237 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
BdnfP21237 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.22□□□□□ -0.29
BdnfP21237 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.22□□□□□ -0.29
BdnfP21237 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.22□□□□□ -0.29
BdnfP21237 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
BdnfP21237 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
BdnfP21237 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.22□□□□□ -0.29
BdnfP21237 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
BdnfP21237 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
BdnfP21237 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
BdnfP21237 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
BdnfP21237 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
BdnfP21237 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
BdnfP21237 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
BdnfP21237 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
BdnfP21237 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
BdnfP21237 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
BdnfP21237 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
BdnfP21237 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
BdnfP21237 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
BdnfP21237 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
BdnfP21237 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
BdnfP21237 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
BdnfP21237 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
BdnfP21237 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
BdnfP21237 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
BdnfP21237 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
BdnfP21237 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
BdnfP21237 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
BdnfP21237 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.21□□□□□ -0.29
BdnfP21237 Gm11594-201ENSMUST00000122313 162 ntBASIC13.21□□□□□ -0.29
BdnfP21237 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
BdnfP21237 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.21□□□□□ -0.29
BdnfP21237 Gm18889-201ENSMUST00000174284 929 ntBASIC13.21□□□□□ -0.29
BdnfP21237 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.21□□□□□ -0.29
BdnfP21237 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
BdnfP21237 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
BdnfP21237 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.21□□□□□ -0.29
BdnfP21237 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms