Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rb1P13405 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rb1P13405 Gm19220-201ENSMUST00000222682 803 ntBASIC14.16□□□□□ -0.14
Rb1P13405 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.16□□□□□ -0.14
Rb1P13405 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rb1P13405 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rb1P13405 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rb1P13405 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.16□□□□□ -0.14
Rb1P13405 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rb1P13405 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rb1P13405 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rb1P13405 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rb1P13405 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rb1P13405 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.16□□□□□ -0.14
Rb1P13405 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rb1P13405 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rb1P13405 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rb1P13405 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rb1P13405 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rb1P13405 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Rb1P13405 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rb1P13405 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rb1P13405 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rb1P13405 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rb1P13405 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rb1P13405 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rb1P13405 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rb1P13405 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rb1P13405 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rb1P13405 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rb1P13405 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rb1P13405 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rb1P13405 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rb1P13405 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rb1P13405 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rb1P13405 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rb1P13405 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
Rb1P13405 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rb1P13405 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rb1P13405 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rb1P13405 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.15□□□□□ -0.14
Rb1P13405 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rb1P13405 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.15□□□□□ -0.14
Rb1P13405 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rb1P13405 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.15□□□□□ -0.14
Rb1P13405 Gm28760-201ENSMUST00000185995 736 ntBASIC14.15□□□□□ -0.14
Rb1P13405 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.15□□□□□ -0.14
Rb1P13405 Gm2451-201ENSMUST00000199447 999 ntBASIC14.15□□□□□ -0.14
Rb1P13405 Gm10290-201ENSMUST00000200451 999 ntBASIC14.15□□□□□ -0.14
Rb1P13405 Gm18062-201ENSMUST00000208020 547 ntBASIC14.15□□□□□ -0.14
Rb1P13405 Gm18055-201ENSMUST00000208254 547 ntBASIC14.15□□□□□ -0.14
Rb1P13405 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rb1P13405 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.15□□□□□ -0.14
Rb1P13405 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rb1P13405 Gm9797-201ENSMUST00000052902 613 ntBASIC14.15□□□□□ -0.14
Rb1P13405 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Rb1P13405 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.15□□□□□ -0.14
Rb1P13405 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rb1P13405 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rb1P13405 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rb1P13405 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rb1P13405 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rb1P13405 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rb1P13405 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rb1P13405 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rb1P13405 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rb1P13405 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rb1P13405 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rb1P13405 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rb1P13405 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rb1P13405 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rb1P13405 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rb1P13405 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.14□□□□□ -0.15
Rb1P13405 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rb1P13405 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rb1P13405 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Rb1P13405 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.14□□□□□ -0.15
Rb1P13405 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.14□□□□□ -0.15
Rb1P13405 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.14□□□□□ -0.15
Rb1P13405 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.14□□□□□ -0.15
Rb1P13405 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.14□□□□□ -0.15
Rb1P13405 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC14.14□□□□□ -0.15
Rb1P13405 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rb1P13405 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rb1P13405 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rb1P13405 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rb1P13405 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rb1P13405 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Rb1P13405 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
Rb1P13405 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Rb1P13405 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rb1P13405 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.14□□□□□ -0.15
Rb1P13405 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rb1P13405 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Rb1P13405 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rb1P13405 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rb1P13405 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rb1P13405 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Rb1P13405 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rb1P13405 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms