Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.21□□□□□ -0.29
Cntn1P12960 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cntn1P12960 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
Cntn1P12960 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.21□□□□□ -0.29
Cntn1P12960 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cntn1P12960 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cntn1P12960 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cntn1P12960 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.21□□□□□ -0.29
Cntn1P12960 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.21□□□□□ -0.29
Cntn1P12960 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.21□□□□□ -0.29
Cntn1P12960 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.21□□□□□ -0.29
Cntn1P12960 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cntn1P12960 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.21□□□□□ -0.29
Cntn1P12960 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Cntn1P12960 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cntn1P12960 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cntn1P12960 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cntn1P12960 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cntn1P12960 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Cntn1P12960 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cntn1P12960 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.21□□□□□ -0.3
Cntn1P12960 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cntn1P12960 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cntn1P12960 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cntn1P12960 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cntn1P12960 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cntn1P12960 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.21□□□□□ -0.3
Cntn1P12960 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
Cntn1P12960 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cntn1P12960 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cntn1P12960 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cntn1P12960 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cntn1P12960 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cntn1P12960 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.2□□□□□ -0.3
Cntn1P12960 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cntn1P12960 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cntn1P12960 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cntn1P12960 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cntn1P12960 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cntn1P12960 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cntn1P12960 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cntn1P12960 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cntn1P12960 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cntn1P12960 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cntn1P12960 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cntn1P12960 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cntn1P12960 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cntn1P12960 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Cntn1P12960 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
Cntn1P12960 Gm11918-201ENSMUST00000121660 179 ntBASIC13.2□□□□□ -0.3
Cntn1P12960 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.2□□□□□ -0.3
Cntn1P12960 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cntn1P12960 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.2□□□□□ -0.3
Cntn1P12960 Gm43094-201ENSMUST00000196549 921 ntBASIC13.2□□□□□ -0.3
Cntn1P12960 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cntn1P12960 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cntn1P12960 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cntn1P12960 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.2□□□□□ -0.3
Cntn1P12960 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cntn1P12960 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cntn1P12960 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cntn1P12960 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cntn1P12960 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cntn1P12960 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cntn1P12960 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cntn1P12960 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cntn1P12960 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cntn1P12960 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cntn1P12960 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cntn1P12960 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.2□□□□□ -0.3
Cntn1P12960 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cntn1P12960 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cntn1P12960 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cntn1P12960 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Cntn1P12960 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cntn1P12960 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cntn1P12960 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cntn1P12960 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cntn1P12960 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cntn1P12960 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cntn1P12960 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cntn1P12960 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cntn1P12960 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Cntn1P12960 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.19□□□□□ -0.3
Cntn1P12960 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cntn1P12960 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cntn1P12960 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cntn1P12960 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cntn1P12960 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cntn1P12960 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cntn1P12960 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cntn1P12960 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cntn1P12960 Mir698-201ENSMUST00000102164 109 ntBASIC13.19□□□□□ -0.3
Cntn1P12960 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cntn1P12960 Gm15678-201ENSMUST00000117573 960 ntBASIC13.19□□□□□ -0.3
Cntn1P12960 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cntn1P12960 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.19□□□□□ -0.3
Cntn1P12960 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.19□□□□□ -0.3
Cntn1P12960 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.19□□□□□ -0.3
Cntn1P12960 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms