Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Gm8410-201ENSMUST00000117225 605 ntBASIC13.33□□□□□ -0.28
Fv4P11370 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.33□□□□□ -0.28
Fv4P11370 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.33□□□□□ -0.28
Fv4P11370 Gm2756-201ENSMUST00000195851 400 ntBASIC13.33□□□□□ -0.28
Fv4P11370 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.33□□□□□ -0.28
Fv4P11370 Gm5312-201ENSMUST00000203728 547 ntBASIC13.33□□□□□ -0.28
Fv4P11370 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Fv4P11370 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.33□□□□□ -0.28
Fv4P11370 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.33□□□□□ -0.28
Fv4P11370 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Fv4P11370 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Fv4P11370 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fv4P11370 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fv4P11370 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fv4P11370 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fv4P11370 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Fv4P11370 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Fv4P11370 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fv4P11370 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fv4P11370 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Fv4P11370 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Fv4P11370 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fv4P11370 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fv4P11370 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fv4P11370 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fv4P11370 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fv4P11370 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Fv4P11370 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.32□□□□□ -0.28
Fv4P11370 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.32□□□□□ -0.28
Fv4P11370 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Fv4P11370 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Fv4P11370 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fv4P11370 Gm27533-201ENSMUST00000183800 152 ntBASIC13.32□□□□□ -0.28
Fv4P11370 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.32□□□□□ -0.28
Fv4P11370 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.32□□□□□ -0.28
Fv4P11370 Gm21470-201ENSMUST00000187680 696 ntBASIC13.32□□□□□ -0.28
Fv4P11370 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Fv4P11370 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.32□□□□□ -0.28
Fv4P11370 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Fv4P11370 Shd-206ENSMUST00000225145 998 ntBASIC13.32□□□□□ -0.28
Fv4P11370 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fv4P11370 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Fv4P11370 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fv4P11370 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.32□□□□□ -0.28
Fv4P11370 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fv4P11370 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fv4P11370 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Fv4P11370 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fv4P11370 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fv4P11370 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Fv4P11370 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.32□□□□□ -0.28
Fv4P11370 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fv4P11370 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fv4P11370 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Fv4P11370 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fv4P11370 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.31□□□□□ -0.28
Fv4P11370 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Fv4P11370 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fv4P11370 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fv4P11370 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fv4P11370 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Fv4P11370 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fv4P11370 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fv4P11370 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Fv4P11370 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Fv4P11370 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Fv4P11370 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fv4P11370 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.31□□□□□ -0.28
Fv4P11370 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fv4P11370 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Fv4P11370 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.31□□□□□ -0.28
Fv4P11370 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.31□□□□□ -0.28
Fv4P11370 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.31□□□□□ -0.28
Fv4P11370 Gm27622-201ENSMUST00000183779 60 ntBASIC13.31□□□□□ -0.28
Fv4P11370 Gm2213-201ENSMUST00000197485 688 ntBASIC13.31□□□□□ -0.28
Fv4P11370 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.31□□□□□ -0.28
Fv4P11370 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.31□□□□□ -0.28
Fv4P11370 Gm9229-201ENSMUST00000222777 126 ntBASIC13.31□□□□□ -0.28
Fv4P11370 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fv4P11370 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fv4P11370 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fv4P11370 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Fv4P11370 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fv4P11370 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fv4P11370 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fv4P11370 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Fv4P11370 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Fv4P11370 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fv4P11370 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Fv4P11370 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Fv4P11370 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Fv4P11370 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Fv4P11370 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Fv4P11370 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fv4P11370 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.3□□□□□ -0.28
Fv4P11370 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Fv4P11370 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Fv4P11370 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fv4P11370 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Fv4P11370 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms