Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ttc3O88196 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Ttc3O88196 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ttc3O88196 Gm5687-201ENSMUST00000118252 640 ntBASIC14.31□□□□□ -0.12
Ttc3O88196 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.31□□□□□ -0.12
Ttc3O88196 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ttc3O88196 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Ttc3O88196 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.31□□□□□ -0.12
Ttc3O88196 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.31□□□□□ -0.12
Ttc3O88196 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC14.31□□□□□ -0.12
Ttc3O88196 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ttc3O88196 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ttc3O88196 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ttc3O88196 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ttc3O88196 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc3O88196 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc3O88196 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc3O88196 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc3O88196 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.3□□□□□ -0.12
Ttc3O88196 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc3O88196 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.3□□□□□ -0.12
Ttc3O88196 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc3O88196 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
Ttc3O88196 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC14.3□□□□□ -0.12
Ttc3O88196 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc3O88196 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc3O88196 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc3O88196 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc3O88196 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc3O88196 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc3O88196 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc3O88196 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc3O88196 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc3O88196 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc3O88196 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc3O88196 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Ttc3O88196 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ttc3O88196 Gm11618-201ENSMUST00000117946 267 ntBASIC14.3□□□□□ -0.12
Ttc3O88196 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc3O88196 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc3O88196 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ttc3O88196 Gm27682-201ENSMUST00000183930 110 ntBASIC14.3□□□□□ -0.12
Ttc3O88196 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.3□□□□□ -0.12
Ttc3O88196 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.3□□□□□ -0.12
Ttc3O88196 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.3□□□□□ -0.12
Ttc3O88196 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.3□□□□□ -0.12
Ttc3O88196 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc3O88196 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc3O88196 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc3O88196 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc3O88196 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc3O88196 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc3O88196 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc3O88196 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc3O88196 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc3O88196 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Ttc3O88196 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc3O88196 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc3O88196 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc3O88196 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc3O88196 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc3O88196 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc3O88196 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc3O88196 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ttc3O88196 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ttc3O88196 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ttc3O88196 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ttc3O88196 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.29□□□□□ -0.12
Ttc3O88196 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ttc3O88196 Gm12384-201ENSMUST00000119228 919 ntBASIC14.29□□□□□ -0.12
Ttc3O88196 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Ttc3O88196 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC14.29□□□□□ -0.12
Ttc3O88196 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ttc3O88196 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.29□□□□□ -0.12
Ttc3O88196 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ttc3O88196 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC14.29□□□□□ -0.12
Ttc3O88196 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ttc3O88196 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ttc3O88196 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.29□□□□□ -0.12
Ttc3O88196 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ttc3O88196 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ttc3O88196 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ttc3O88196 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.29□□□□□ -0.12
Ttc3O88196 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ttc3O88196 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ttc3O88196 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ttc3O88196 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ttc3O88196 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Ttc3O88196 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ttc3O88196 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ttc3O88196 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.29□□□□□ -0.12
Ttc3O88196 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ttc3O88196 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ttc3O88196 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ttc3O88196 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ttc3O88196 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ttc3O88196 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ttc3O88196 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ttc3O88196 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ttc3O88196 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms