Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim1O70400 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Pdlim1O70400 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim1O70400 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.61□□□□□ -0.23
Pdlim1O70400 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim1O70400 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim1O70400 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.61□□□□□ -0.23
Pdlim1O70400 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim1O70400 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim1O70400 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.61□□□□□ -0.23
Pdlim1O70400 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim1O70400 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim1O70400 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim1O70400 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim1O70400 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
Pdlim1O70400 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Pdlim1O70400 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim1O70400 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim1O70400 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim1O70400 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim1O70400 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim1O70400 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.61□□□□□ -0.23
Pdlim1O70400 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.61□□□□□ -0.23
Pdlim1O70400 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Pdlim1O70400 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim1O70400 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Pdlim1O70400 Gm28631-201ENSMUST00000190740 334 ntBASIC13.61□□□□□ -0.23
Pdlim1O70400 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim1O70400 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim1O70400 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.61□□□□□ -0.23
Pdlim1O70400 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.61□□□□□ -0.23
Pdlim1O70400 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim1O70400 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Pdlim1O70400 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim1O70400 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Pdlim1O70400 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim1O70400 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim1O70400 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim1O70400 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Pdlim1O70400 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Pdlim1O70400 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim1O70400 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim1O70400 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim1O70400 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim1O70400 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim1O70400 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim1O70400 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim1O70400 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim1O70400 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim1O70400 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim1O70400 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pdlim1O70400 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim1O70400 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim1O70400 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim1O70400 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim1O70400 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim1O70400 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.6□□□□□ -0.23
Pdlim1O70400 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pdlim1O70400 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.6□□□□□ -0.23
Pdlim1O70400 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.6□□□□□ -0.23
Pdlim1O70400 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim1O70400 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.6□□□□□ -0.23
Pdlim1O70400 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim1O70400 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim1O70400 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.6□□□□□ -0.23
Pdlim1O70400 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim1O70400 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim1O70400 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.6□□□□□ -0.23
Pdlim1O70400 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim1O70400 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim1O70400 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim1O70400 Gm2423-201ENSMUST00000074863 733 ntBASIC13.6□□□□□ -0.23
Pdlim1O70400 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim1O70400 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim1O70400 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim1O70400 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim1O70400 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim1O70400 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim1O70400 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim1O70400 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Pdlim1O70400 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim1O70400 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim1O70400 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
Pdlim1O70400 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim1O70400 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pdlim1O70400 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdlim1O70400 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdlim1O70400 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdlim1O70400 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdlim1O70400 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pdlim1O70400 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pdlim1O70400 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.59□□□□□ -0.23
Pdlim1O70400 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.59□□□□□ -0.23
Pdlim1O70400 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Pdlim1O70400 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Pdlim1O70400 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.59□□□□□ -0.23
Pdlim1O70400 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.59□□□□□ -0.23
Pdlim1O70400 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pdlim1O70400 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pdlim1O70400 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms