Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cxcl13O55038 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cxcl13O55038 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Cxcl13O55038 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Cxcl13O55038 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cxcl13O55038 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cxcl13O55038 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cxcl13O55038 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cxcl13O55038 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cxcl13O55038 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cxcl13O55038 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cxcl13O55038 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cxcl13O55038 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cxcl13O55038 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cxcl13O55038 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cxcl13O55038 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Cxcl13O55038 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cxcl13O55038 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cxcl13O55038 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Cxcl13O55038 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cxcl13O55038 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cxcl13O55038 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
Cxcl13O55038 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cxcl13O55038 Gm11814-201ENSMUST00000119515 929 ntBASIC11.62□□□□□ -0.55
Cxcl13O55038 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Cxcl13O55038 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.62□□□□□ -0.55
Cxcl13O55038 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.62□□□□□ -0.55
Cxcl13O55038 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.62□□□□□ -0.55
Cxcl13O55038 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.62□□□□□ -0.55
Cxcl13O55038 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.62□□□□□ -0.55
Cxcl13O55038 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cxcl13O55038 Gm38671-201ENSMUST00000200573 130 ntBASIC11.62□□□□□ -0.55
Cxcl13O55038 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.62□□□□□ -0.55
Cxcl13O55038 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Cxcl13O55038 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.62□□□□□ -0.55
Cxcl13O55038 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cxcl13O55038 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cxcl13O55038 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cxcl13O55038 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cxcl13O55038 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cxcl13O55038 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Cxcl13O55038 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cxcl13O55038 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cxcl13O55038 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cxcl13O55038 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.62□□□□□ -0.55
Cxcl13O55038 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cxcl13O55038 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cxcl13O55038 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cxcl13O55038 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cxcl13O55038 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cxcl13O55038 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cxcl13O55038 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cxcl13O55038 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cxcl13O55038 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC11.62□□□□□ -0.55
Cxcl13O55038 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cxcl13O55038 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.61□□□□□ -0.55
Cxcl13O55038 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Cxcl13O55038 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC11.61□□□□□ -0.55
Cxcl13O55038 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cxcl13O55038 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Cxcl13O55038 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Cxcl13O55038 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.61□□□□□ -0.55
Cxcl13O55038 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Cxcl13O55038 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Cxcl13O55038 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cxcl13O55038 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cxcl13O55038 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cxcl13O55038 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Cxcl13O55038 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cxcl13O55038 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Cxcl13O55038 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cxcl13O55038 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cxcl13O55038 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cxcl13O55038 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.61□□□□□ -0.55
Cxcl13O55038 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.61□□□□□ -0.55
Cxcl13O55038 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cxcl13O55038 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Cxcl13O55038 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cxcl13O55038 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cxcl13O55038 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cxcl13O55038 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cxcl13O55038 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cxcl13O55038 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Cxcl13O55038 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cxcl13O55038 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cxcl13O55038 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cxcl13O55038 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cxcl13O55038 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cxcl13O55038 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cxcl13O55038 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cxcl13O55038 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cxcl13O55038 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cxcl13O55038 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cxcl13O55038 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cxcl13O55038 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cxcl13O55038 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cxcl13O55038 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC11.6□□□□□ -0.55
Cxcl13O55038 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cxcl13O55038 Gm43697-201ENSMUST00000199637 2581 ntBASIC11.6□□□□□ -0.55
Cxcl13O55038 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms