Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Gm24447-201ENSMUST00000083977 338 ntBASIC14.28□□□□□ -0.12
Cldn5O54942 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn5O54942 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Cldn5O54942 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn5O54942 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn5O54942 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn5O54942 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn5O54942 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn5O54942 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn5O54942 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.27□□□□□ -0.12
Cldn5O54942 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.27□□□□□ -0.12
Cldn5O54942 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn5O54942 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn5O54942 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Cldn5O54942 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.27□□□□□ -0.12
Cldn5O54942 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn5O54942 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Cldn5O54942 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn5O54942 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn5O54942 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn5O54942 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.27□□□□□ -0.13
Cldn5O54942 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.27□□□□□ -0.13
Cldn5O54942 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.27□□□□□ -0.13
Cldn5O54942 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn5O54942 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.27□□□□□ -0.13
Cldn5O54942 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn5O54942 Gm5161-201ENSMUST00000075243 853 ntBASIC14.27□□□□□ -0.13
Cldn5O54942 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn5O54942 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn5O54942 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn5O54942 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Cldn5O54942 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cldn5O54942 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn5O54942 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cldn5O54942 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn5O54942 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn5O54942 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.26□□□□□ -0.13
Cldn5O54942 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn5O54942 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn5O54942 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.26□□□□□ -0.13
Cldn5O54942 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.26□□□□□ -0.13
Cldn5O54942 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn5O54942 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn5O54942 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn5O54942 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn5O54942 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Cldn5O54942 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cldn5O54942 Gm15429-201ENSMUST00000151268 798 ntBASIC14.26□□□□□ -0.13
Cldn5O54942 Gm2495-201ENSMUST00000191160 466 ntBASIC14.26□□□□□ -0.13
Cldn5O54942 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn5O54942 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn5O54942 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn5O54942 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn5O54942 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cldn5O54942 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cldn5O54942 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn5O54942 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.26□□□□□ -0.13
Cldn5O54942 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.26□□□□□ -0.13
Cldn5O54942 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn5O54942 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn5O54942 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn5O54942 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn5O54942 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn5O54942 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.25□□□□□ -0.13
Cldn5O54942 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn5O54942 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cldn5O54942 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn5O54942 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cldn5O54942 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cldn5O54942 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn5O54942 Gm15806-201ENSMUST00000120696 955 ntBASIC14.25□□□□□ -0.13
Cldn5O54942 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.25□□□□□ -0.13
Cldn5O54942 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn5O54942 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn5O54942 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn5O54942 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn5O54942 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn5O54942 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn5O54942 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.25□□□□□ -0.13
Cldn5O54942 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn5O54942 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cldn5O54942 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn5O54942 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn5O54942 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn5O54942 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn5O54942 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn5O54942 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cldn5O54942 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn5O54942 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn5O54942 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn5O54942 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn5O54942 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn5O54942 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn5O54942 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.25□□□□□ -0.13
Cldn5O54942 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.25□□□□□ -0.13
Cldn5O54942 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn5O54942 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn5O54942 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.24□□□□□ -0.13
Cldn5O54942 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn5O54942 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 98.9 ms