Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Gm45638-201ENSMUST00000211507 2878 ntBASIC10.9□□□□□ -0.67
Efnb3O35393 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Efnb3O35393 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Efnb3O35393 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Efnb3O35393 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Efnb3O35393 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Efnb3O35393 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC10.9□□□□□ -0.67
Efnb3O35393 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Efnb3O35393 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Efnb3O35393 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Efnb3O35393 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Efnb3O35393 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Efnb3O35393 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Efnb3O35393 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Efnb3O35393 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC10.89□□□□□ -0.67
Efnb3O35393 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Efnb3O35393 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC10.89□□□□□ -0.67
Efnb3O35393 Gm7002-201ENSMUST00000221386 2165 ntBASIC10.89□□□□□ -0.67
Efnb3O35393 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Efnb3O35393 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Efnb3O35393 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Efnb3O35393 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Efnb3O35393 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Efnb3O35393 Gm6756-201ENSMUST00000180647 1620 ntBASIC10.89□□□□□ -0.67
Efnb3O35393 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Efnb3O35393 Gm9385-201ENSMUST00000117563 472 ntBASIC10.89□□□□□ -0.67
Efnb3O35393 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Efnb3O35393 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Efnb3O35393 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC10.89□□□□□ -0.67
Efnb3O35393 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC10.89□□□□□ -0.67
Efnb3O35393 Gm5264-201ENSMUST00000190584 848 ntBASIC10.89□□□□□ -0.67
Efnb3O35393 Gm44945-201ENSMUST00000206764 1187 ntBASIC10.89□□□□□ -0.67
Efnb3O35393 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Efnb3O35393 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Efnb3O35393 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Efnb3O35393 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Efnb3O35393 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Efnb3O35393 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Efnb3O35393 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Efnb3O35393 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Efnb3O35393 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Efnb3O35393 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Efnb3O35393 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Efnb3O35393 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Efnb3O35393 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Efnb3O35393 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Efnb3O35393 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Efnb3O35393 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Efnb3O35393 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Efnb3O35393 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Efnb3O35393 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Efnb3O35393 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC10.89□□□□□ -0.67
Efnb3O35393 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Efnb3O35393 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Efnb3O35393 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Efnb3O35393 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Efnb3O35393 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Efnb3O35393 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Efnb3O35393 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Efnb3O35393 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Efnb3O35393 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Efnb3O35393 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Efnb3O35393 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC10.88□□□□□ -0.67
Efnb3O35393 CT025626.1-201ENSMUST00000223735 1455 ntBASIC10.88□□□□□ -0.67
Efnb3O35393 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Efnb3O35393 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Efnb3O35393 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Efnb3O35393 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC10.88□□□□□ -0.67
Efnb3O35393 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Efnb3O35393 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Efnb3O35393 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Efnb3O35393 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Efnb3O35393 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC10.88□□□□□ -0.67
Efnb3O35393 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Efnb3O35393 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC10.88□□□□□ -0.67
Efnb3O35393 Gm15957-201ENSMUST00000118893 974 ntBASIC10.88□□□□□ -0.67
Efnb3O35393 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Efnb3O35393 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Efnb3O35393 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Efnb3O35393 Gm7229-201ENSMUST00000214719 1007 ntBASIC10.88□□□□□ -0.67
Efnb3O35393 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC10.88□□□□□ -0.67
Efnb3O35393 AC090659.1-201ENSMUST00000224334 768 ntBASIC10.88□□□□□ -0.67
Efnb3O35393 CT030704.2-201ENSMUST00000228887 494 ntBASIC10.88□□□□□ -0.67
Efnb3O35393 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Efnb3O35393 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Efnb3O35393 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Efnb3O35393 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Efnb3O35393 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Efnb3O35393 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC10.88□□□□□ -0.67
Efnb3O35393 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Efnb3O35393 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Efnb3O35393 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Efnb3O35393 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC10.88□□□□□ -0.67
Efnb3O35393 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Efnb3O35393 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Efnb3O35393 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Efnb3O35393 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Efnb3O35393 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Efnb3O35393 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Efnb3O35393 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms