Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac1O09106 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Hdac1O09106 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac1O09106 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac1O09106 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac1O09106 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac1O09106 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac1O09106 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Hdac1O09106 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac1O09106 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac1O09106 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac1O09106 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac1O09106 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Hdac1O09106 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac1O09106 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac1O09106 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac1O09106 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac1O09106 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC16.38■□□□□ 0.21
Hdac1O09106 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac1O09106 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac1O09106 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac1O09106 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Hdac1O09106 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac1O09106 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC16.38■□□□□ 0.21
Hdac1O09106 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac1O09106 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac1O09106 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.38■□□□□ 0.21
Hdac1O09106 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC16.38■□□□□ 0.21
Hdac1O09106 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.38■□□□□ 0.21
Hdac1O09106 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac1O09106 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac1O09106 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac1O09106 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac1O09106 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Hdac1O09106 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac1O09106 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac1O09106 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac1O09106 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC16.38■□□□□ 0.21
Hdac1O09106 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac1O09106 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac1O09106 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac1O09106 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac1O09106 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC16.38■□□□□ 0.21
Hdac1O09106 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac1O09106 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hdac1O09106 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC16.37■□□□□ 0.21
Hdac1O09106 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hdac1O09106 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hdac1O09106 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hdac1O09106 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC16.37■□□□□ 0.21
Hdac1O09106 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hdac1O09106 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hdac1O09106 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hdac1O09106 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hdac1O09106 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hdac1O09106 Mir1895-201ENSMUST00000122615 79 ntBASIC16.37■□□□□ 0.21
Hdac1O09106 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC16.37■□□□□ 0.21
Hdac1O09106 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hdac1O09106 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.37■□□□□ 0.21
Hdac1O09106 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.37■□□□□ 0.21
Hdac1O09106 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.37■□□□□ 0.21
Hdac1O09106 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hdac1O09106 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hdac1O09106 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hdac1O09106 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
Hdac1O09106 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC16.37■□□□□ 0.21
Hdac1O09106 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hdac1O09106 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hdac1O09106 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Hdac1O09106 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hdac1O09106 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Hdac1O09106 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Hdac1O09106 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hdac1O09106 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hdac1O09106 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hdac1O09106 AC168058.1-201ENSMUST00000219521 2282 ntBASIC16.36■□□□□ 0.21
Hdac1O09106 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hdac1O09106 AC124751.1-201ENSMUST00000222716 1408 ntBASIC16.36■□□□□ 0.21
Hdac1O09106 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hdac1O09106 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hdac1O09106 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hdac1O09106 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hdac1O09106 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hdac1O09106 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hdac1O09106 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hdac1O09106 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hdac1O09106 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hdac1O09106 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hdac1O09106 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hdac1O09106 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hdac1O09106 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC16.36■□□□□ 0.21
Hdac1O09106 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hdac1O09106 Mir6990-201ENSMUST00000183724 91 ntBASIC16.36■□□□□ 0.21
Hdac1O09106 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Hdac1O09106 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hdac1O09106 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hdac1O09106 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hdac1O09106 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hdac1O09106 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Hdac1O09106 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms