Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf3O08791 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ebf3O08791 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf3O08791 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf3O08791 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.32□□□□□ -0.12
Ebf3O08791 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf3O08791 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ebf3O08791 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Ebf3O08791 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ebf3O08791 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf3O08791 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf3O08791 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.31□□□□□ -0.12
Ebf3O08791 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf3O08791 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf3O08791 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf3O08791 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf3O08791 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf3O08791 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf3O08791 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf3O08791 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.31□□□□□ -0.12
Ebf3O08791 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.31□□□□□ -0.12
Ebf3O08791 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.31□□□□□ -0.12
Ebf3O08791 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf3O08791 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf3O08791 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf3O08791 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ebf3O08791 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.31□□□□□ -0.12
Ebf3O08791 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf3O08791 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf3O08791 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf3O08791 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Ebf3O08791 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ebf3O08791 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ebf3O08791 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ebf3O08791 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf3O08791 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf3O08791 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf3O08791 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf3O08791 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf3O08791 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf3O08791 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf3O08791 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf3O08791 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ebf3O08791 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf3O08791 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf3O08791 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf3O08791 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.3□□□□□ -0.12
Ebf3O08791 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf3O08791 Gm6244-201ENSMUST00000178732 841 ntBASIC14.3□□□□□ -0.12
Ebf3O08791 Gm27839-201ENSMUST00000184242 106 ntBASIC14.3□□□□□ -0.12
Ebf3O08791 AY702102-202ENSMUST00000194651 1173 ntBASIC14.3□□□□□ -0.12
Ebf3O08791 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.3□□□□□ -0.12
Ebf3O08791 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.3□□□□□ -0.12
Ebf3O08791 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.3□□□□□ -0.12
Ebf3O08791 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf3O08791 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf3O08791 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf3O08791 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ebf3O08791 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf3O08791 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf3O08791 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ebf3O08791 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf3O08791 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf3O08791 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf3O08791 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ebf3O08791 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf3O08791 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf3O08791 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf3O08791 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ebf3O08791 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf3O08791 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf3O08791 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf3O08791 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf3O08791 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf3O08791 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf3O08791 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf3O08791 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf3O08791 Gm15240-201ENSMUST00000118156 720 ntBASIC14.29□□□□□ -0.12
Ebf3O08791 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.29□□□□□ -0.12
Ebf3O08791 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.29□□□□□ -0.12
Ebf3O08791 Gm43630-201ENSMUST00000201550 776 ntBASIC14.29□□□□□ -0.12
Ebf3O08791 Gm18905-201ENSMUST00000205454 928 ntBASIC14.29□□□□□ -0.12
Ebf3O08791 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf3O08791 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.29□□□□□ -0.12
Ebf3O08791 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.29□□□□□ -0.12
Ebf3O08791 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.29□□□□□ -0.12
Ebf3O08791 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf3O08791 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf3O08791 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf3O08791 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf3O08791 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf3O08791 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf3O08791 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf3O08791 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf3O08791 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf3O08791 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Ebf3O08791 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf3O08791 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf3O08791 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.29□□□□□ -0.12
Ebf3O08791 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 94.7 ms