Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh9F8VPK8 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh9F8VPK8 Mir698-201ENSMUST00000102164 109 ntBASIC14.14□□□□□ -0.15
Pcdh9F8VPK8 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.14□□□□□ -0.15
Pcdh9F8VPK8 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.14□□□□□ -0.15
Pcdh9F8VPK8 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.14□□□□□ -0.15
Pcdh9F8VPK8 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.14□□□□□ -0.15
Pcdh9F8VPK8 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.14□□□□□ -0.15
Pcdh9F8VPK8 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.14□□□□□ -0.15
Pcdh9F8VPK8 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.14□□□□□ -0.15
Pcdh9F8VPK8 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Pcdh9F8VPK8 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh9F8VPK8 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh9F8VPK8 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.14□□□□□ -0.15
Pcdh9F8VPK8 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh9F8VPK8 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh9F8VPK8 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh9F8VPK8 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh9F8VPK8 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh9F8VPK8 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh9F8VPK8 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh9F8VPK8 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh9F8VPK8 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh9F8VPK8 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pcdh9F8VPK8 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh9F8VPK8 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.14□□□□□ -0.15
Pcdh9F8VPK8 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh9F8VPK8 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Pcdh9F8VPK8 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh9F8VPK8 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh9F8VPK8 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh9F8VPK8 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh9F8VPK8 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh9F8VPK8 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh9F8VPK8 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh9F8VPK8 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh9F8VPK8 Gm24543-201ENSMUST00000103867 82 ntBASIC14.13□□□□□ -0.15
Pcdh9F8VPK8 Mir449b-201ENSMUST00000104833 80 ntBASIC14.13□□□□□ -0.15
Pcdh9F8VPK8 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh9F8VPK8 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Pcdh9F8VPK8 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.13□□□□□ -0.15
Pcdh9F8VPK8 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.13□□□□□ -0.15
Pcdh9F8VPK8 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.13□□□□□ -0.15
Pcdh9F8VPK8 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh9F8VPK8 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh9F8VPK8 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh9F8VPK8 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.13□□□□□ -0.15
Pcdh9F8VPK8 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh9F8VPK8 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Pcdh9F8VPK8 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Pcdh9F8VPK8 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh9F8VPK8 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh9F8VPK8 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Pcdh9F8VPK8 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Pcdh9F8VPK8 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh9F8VPK8 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.13□□□□□ -0.15
Pcdh9F8VPK8 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Pcdh9F8VPK8 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh9F8VPK8 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh9F8VPK8 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh9F8VPK8 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh9F8VPK8 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.13□□□□□ -0.15
Pcdh9F8VPK8 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh9F8VPK8 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Pcdh9F8VPK8 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh9F8VPK8 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh9F8VPK8 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Pcdh9F8VPK8 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Pcdh9F8VPK8 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh9F8VPK8 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh9F8VPK8 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh9F8VPK8 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh9F8VPK8 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Pcdh9F8VPK8 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh9F8VPK8 Gm33320-201ENSMUST00000192232 530 ntBASIC14.12□□□□□ -0.15
Pcdh9F8VPK8 Gm5779-201ENSMUST00000218467 910 ntBASIC14.12□□□□□ -0.15
Pcdh9F8VPK8 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Pcdh9F8VPK8 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh9F8VPK8 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh9F8VPK8 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh9F8VPK8 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh9F8VPK8 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh9F8VPK8 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh9F8VPK8 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh9F8VPK8 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh9F8VPK8 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh9F8VPK8 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh9F8VPK8 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh9F8VPK8 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh9F8VPK8 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh9F8VPK8 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh9F8VPK8 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh9F8VPK8 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.11□□□□□ -0.15
Pcdh9F8VPK8 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh9F8VPK8 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh9F8VPK8 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh9F8VPK8 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.11□□□□□ -0.15
Pcdh9F8VPK8 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh9F8VPK8 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh9F8VPK8 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms