Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc149F6V035 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Ccdc149F6V035 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc149F6V035 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc149F6V035 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Ccdc149F6V035 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc149F6V035 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc149F6V035 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc149F6V035 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc149F6V035 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc149F6V035 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc149F6V035 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.96□□□□□ -0.17
Ccdc149F6V035 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc149F6V035 Gm12134-201ENSMUST00000122109 520 ntBASIC13.96□□□□□ -0.17
Ccdc149F6V035 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.96□□□□□ -0.17
Ccdc149F6V035 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc149F6V035 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Ccdc149F6V035 AY702102-202ENSMUST00000194651 1173 ntBASIC13.96□□□□□ -0.17
Ccdc149F6V035 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.96□□□□□ -0.17
Ccdc149F6V035 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc149F6V035 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc149F6V035 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc149F6V035 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc149F6V035 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc149F6V035 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.96□□□□□ -0.17
Ccdc149F6V035 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc149F6V035 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.96□□□□□ -0.17
Ccdc149F6V035 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Ccdc149F6V035 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.96□□□□□ -0.17
Ccdc149F6V035 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc149F6V035 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc149F6V035 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc149F6V035 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc149F6V035 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc149F6V035 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc149F6V035 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc149F6V035 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc149F6V035 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc149F6V035 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc149F6V035 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc149F6V035 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Ccdc149F6V035 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc149F6V035 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc149F6V035 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc149F6V035 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc149F6V035 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc149F6V035 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc149F6V035 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc149F6V035 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc149F6V035 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc149F6V035 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc149F6V035 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc149F6V035 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc149F6V035 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc149F6V035 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc149F6V035 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc149F6V035 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc149F6V035 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc149F6V035 Mir1982-201ENSMUST00000157368 74 ntBASIC13.95□□□□□ -0.18
Ccdc149F6V035 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Ccdc149F6V035 Gm2445-201ENSMUST00000182798 989 ntBASIC13.95□□□□□ -0.18
Ccdc149F6V035 Gm27847-201ENSMUST00000183711 107 ntBASIC13.95□□□□□ -0.18
Ccdc149F6V035 Gm27375-201ENSMUST00000183799 107 ntBASIC13.95□□□□□ -0.18
Ccdc149F6V035 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.95□□□□□ -0.18
Ccdc149F6V035 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.95□□□□□ -0.18
Ccdc149F6V035 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Ccdc149F6V035 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Ccdc149F6V035 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc149F6V035 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc149F6V035 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc149F6V035 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc149F6V035 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.95□□□□□ -0.18
Ccdc149F6V035 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc149F6V035 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc149F6V035 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc149F6V035 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc149F6V035 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc149F6V035 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc149F6V035 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc149F6V035 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc149F6V035 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc149F6V035 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Ccdc149F6V035 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc149F6V035 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.94□□□□□ -0.18
Ccdc149F6V035 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.94□□□□□ -0.18
Ccdc149F6V035 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Ccdc149F6V035 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc149F6V035 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc149F6V035 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc149F6V035 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc149F6V035 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Ccdc149F6V035 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Ccdc149F6V035 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.94□□□□□ -0.18
Ccdc149F6V035 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.94□□□□□ -0.18
Ccdc149F6V035 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc149F6V035 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc149F6V035 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc149F6V035 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc149F6V035 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc149F6V035 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms