Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
Ube4aE9Q735 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube4aE9Q735 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube4aE9Q735 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube4aE9Q735 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube4aE9Q735 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube4aE9Q735 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube4aE9Q735 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Ube4aE9Q735 Gm10339-203ENSMUST00000225409 1671 ntBASIC16.46■□□□□ 0.23
Ube4aE9Q735 Gm10040-201ENSMUST00000080726 1662 ntBASIC16.46■□□□□ 0.23
Ube4aE9Q735 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC16.46■□□□□ 0.23
Ube4aE9Q735 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ube4aE9Q735 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ube4aE9Q735 Gm15544-201ENSMUST00000118776 1531 ntBASIC16.46■□□□□ 0.23
Ube4aE9Q735 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Ube4aE9Q735 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.46■□□□□ 0.23
Ube4aE9Q735 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.46■□□□□ 0.23
Ube4aE9Q735 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ube4aE9Q735 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Ube4aE9Q735 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC16.46■□□□□ 0.23
Ube4aE9Q735 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC16.46■□□□□ 0.23
Ube4aE9Q735 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ube4aE9Q735 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ube4aE9Q735 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ube4aE9Q735 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC16.46■□□□□ 0.23
Ube4aE9Q735 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ube4aE9Q735 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ube4aE9Q735 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Ube4aE9Q735 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ube4aE9Q735 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ube4aE9Q735 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ube4aE9Q735 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ube4aE9Q735 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ube4aE9Q735 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ube4aE9Q735 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Ube4aE9Q735 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ube4aE9Q735 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ube4aE9Q735 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Ube4aE9Q735 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ube4aE9Q735 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ube4aE9Q735 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ube4aE9Q735 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ube4aE9Q735 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ube4aE9Q735 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ube4aE9Q735 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ube4aE9Q735 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ube4aE9Q735 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ube4aE9Q735 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ube4aE9Q735 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ube4aE9Q735 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Ube4aE9Q735 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
Ube4aE9Q735 Gm27682-201ENSMUST00000183930 110 ntBASIC16.45■□□□□ 0.22
Ube4aE9Q735 Gm37497-201ENSMUST00000195830 798 ntBASIC16.45■□□□□ 0.22
Ube4aE9Q735 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC16.45■□□□□ 0.22
Ube4aE9Q735 AC173210.1-201ENSMUST00000222341 1131 ntBASIC16.45■□□□□ 0.22
Ube4aE9Q735 Gm2824-203ENSMUST00000226189 1228 ntBASIC16.45■□□□□ 0.22
Ube4aE9Q735 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ube4aE9Q735 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Ube4aE9Q735 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ube4aE9Q735 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Ube4aE9Q735 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ube4aE9Q735 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ube4aE9Q735 Gm26513-201ENSMUST00000181802 2489 ntBASIC16.45■□□□□ 0.22
Ube4aE9Q735 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.45■□□□□ 0.22
Ube4aE9Q735 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ube4aE9Q735 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.45■□□□□ 0.22
Ube4aE9Q735 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ube4aE9Q735 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Ube4aE9Q735 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Ube4aE9Q735 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ube4aE9Q735 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ube4aE9Q735 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ube4aE9Q735 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ube4aE9Q735 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ube4aE9Q735 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ube4aE9Q735 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ube4aE9Q735 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Ube4aE9Q735 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ube4aE9Q735 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ube4aE9Q735 Gm1335-201ENSMUST00000121653 386 ntBASIC16.44■□□□□ 0.22
Ube4aE9Q735 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ube4aE9Q735 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC16.44■□□□□ 0.22
Ube4aE9Q735 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC16.44■□□□□ 0.22
Ube4aE9Q735 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ube4aE9Q735 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC16.44■□□□□ 0.22
Ube4aE9Q735 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ube4aE9Q735 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Ube4aE9Q735 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Ube4aE9Q735 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Ube4aE9Q735 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ube4aE9Q735 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ube4aE9Q735 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Ube4aE9Q735 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Ube4aE9Q735 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Ube4aE9Q735 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ube4aE9Q735 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Ube4aE9Q735 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ube4aE9Q735 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ube4aE9Q735 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ube4aE9Q735 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms