Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a4A2AX52 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC11.62□□□□□ -0.55
Col6a4A2AX52 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a4A2AX52 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Col6a4A2AX52 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a4A2AX52 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a4A2AX52 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a4A2AX52 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a4A2AX52 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a4A2AX52 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.61□□□□□ -0.55
Col6a4A2AX52 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a4A2AX52 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.61□□□□□ -0.55
Col6a4A2AX52 Gm8927-201ENSMUST00000181978 981 ntBASIC11.61□□□□□ -0.55
Col6a4A2AX52 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a4A2AX52 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.61□□□□□ -0.55
Col6a4A2AX52 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a4A2AX52 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.61□□□□□ -0.55
Col6a4A2AX52 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.61□□□□□ -0.55
Col6a4A2AX52 Gm3222-201ENSMUST00000071282 990 ntBASIC11.61□□□□□ -0.55
Col6a4A2AX52 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Col6a4A2AX52 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a4A2AX52 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Col6a4A2AX52 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a4A2AX52 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC11.61□□□□□ -0.55
Col6a4A2AX52 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a4A2AX52 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a4A2AX52 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC11.61□□□□□ -0.55
Col6a4A2AX52 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a4A2AX52 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Col6a4A2AX52 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a4A2AX52 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a4A2AX52 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a4A2AX52 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Col6a4A2AX52 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a4A2AX52 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a4A2AX52 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.61□□□□□ -0.55
Col6a4A2AX52 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a4A2AX52 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Col6a4A2AX52 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a4A2AX52 Gm18753-201ENSMUST00000201000 566 ntBASIC11.61□□□□□ -0.55
Col6a4A2AX52 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a4A2AX52 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Col6a4A2AX52 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a4A2AX52 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a4A2AX52 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a4A2AX52 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.61□□□□□ -0.55
Col6a4A2AX52 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a4A2AX52 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a4A2AX52 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a4A2AX52 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a4A2AX52 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a4A2AX52 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a4A2AX52 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Col6a4A2AX52 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a4A2AX52 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a4A2AX52 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Col6a4A2AX52 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Col6a4A2AX52 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.6□□□□□ -0.55
Col6a4A2AX52 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a4A2AX52 Gm22323-201ENSMUST00000103832 109 ntBASIC11.6□□□□□ -0.55
Col6a4A2AX52 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.6□□□□□ -0.55
Col6a4A2AX52 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a4A2AX52 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.6□□□□□ -0.55
Col6a4A2AX52 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Col6a4A2AX52 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a4A2AX52 Proscos-202ENSMUST00000178990 666 ntBASIC11.6□□□□□ -0.55
Col6a4A2AX52 Gm44397-201ENSMUST00000195950 113 ntBASIC11.6□□□□□ -0.55
Col6a4A2AX52 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.6□□□□□ -0.55
Col6a4A2AX52 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a4A2AX52 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Col6a4A2AX52 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a4A2AX52 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.6□□□□□ -0.55
Col6a4A2AX52 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.6□□□□□ -0.55
Col6a4A2AX52 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a4A2AX52 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Col6a4A2AX52 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a4A2AX52 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a4A2AX52 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a4A2AX52 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a4A2AX52 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a4A2AX52 Gm8213-201ENSMUST00000118191 441 ntBASIC11.6□□□□□ -0.55
Col6a4A2AX52 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a4A2AX52 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.6□□□□□ -0.55
Col6a4A2AX52 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.6□□□□□ -0.55
Col6a4A2AX52 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a4A2AX52 Gm44608-201ENSMUST00000206827 855 ntBASIC11.6□□□□□ -0.55
Col6a4A2AX52 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a4A2AX52 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Col6a4A2AX52 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a4A2AX52 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a4A2AX52 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a4A2AX52 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a4A2AX52 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a4A2AX52 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a4A2AX52 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a4A2AX52 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a4A2AX52 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a4A2AX52 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a4A2AX52 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a4A2AX52 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms