Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gm7336-201ENSMUST00000107041 1232 ntBASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gm22175-201ENSMUST00000175007 78 ntBASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gm37714-201ENSMUST00000194742 342 ntBASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Shd-206ENSMUST00000225145 998 ntBASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gm15693-201ENSMUST00000120470 637 ntBASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gm33320-201ENSMUST00000192232 530 ntBASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gm38294-201ENSMUST00000192831 381 ntBASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gm37277-201ENSMUST00000194052 1111 ntBASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gm46209-201ENSMUST00000217912 553 ntBASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 AC124732.2-201ENSMUST00000221977 316 ntBASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Trav9n-2A0A0G2JDP3 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav9n-2A0A0G2JDP3 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms