Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Gm15427-201ENSMUST00000117288 531 ntBASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Gm16026-204ENSMUST00000162652 683 ntBASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Gm24513-201ENSMUST00000174964 138 ntBASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Gm27397-201ENSMUST00000184997 107 ntBASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Gm37935-201ENSMUST00000192012 982 ntBASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 CT943659.1-201ENSMUST00000215459 326 ntBASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 Gm14752-201ENSMUST00000120719 2075 ntBASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 Gm16198-201ENSMUST00000118766 670 ntBASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 Gm11594-201ENSMUST00000122313 162 ntBASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 Gm6736-201ENSMUST00000166583 948 ntBASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 Gm18737-201ENSMUST00000173594 937 ntBASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 Gm6944-201ENSMUST00000182449 1006 ntBASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 AC131743.5-201ENSMUST00000220775 1618 ntBASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Trav6n-6A0A075B6B2 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Gm43463-201ENSMUST00000195967 1803 ntBASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms