Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Speer3W4VSP1 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Speer3W4VSP1 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Speer3W4VSP1 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Speer3W4VSP1 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Speer3W4VSP1 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Speer3W4VSP1 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Speer3W4VSP1 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Speer3W4VSP1 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Speer3W4VSP1 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Speer3W4VSP1 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Speer3W4VSP1 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Speer3W4VSP1 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Speer3W4VSP1 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Speer3W4VSP1 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Speer3W4VSP1 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Speer3W4VSP1 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Speer3W4VSP1 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Speer3W4VSP1 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Speer3W4VSP1 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Speer3W4VSP1 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Speer3W4VSP1 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Speer3W4VSP1 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Speer3W4VSP1 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Speer3W4VSP1 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Speer3W4VSP1 Mir1895-201ENSMUST00000122615 79 ntBASIC14.14□□□□□ -0.15
Speer3W4VSP1 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.14□□□□□ -0.15
Speer3W4VSP1 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Speer3W4VSP1 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.14□□□□□ -0.15
Speer3W4VSP1 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC14.14□□□□□ -0.15
Speer3W4VSP1 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.14□□□□□ -0.15
Speer3W4VSP1 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.14□□□□□ -0.15
Speer3W4VSP1 Gm37720-201ENSMUST00000195497 1241 ntBASIC14.14□□□□□ -0.15
Speer3W4VSP1 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Speer3W4VSP1 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.14□□□□□ -0.15
Speer3W4VSP1 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Speer3W4VSP1 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Speer3W4VSP1 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Speer3W4VSP1 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Speer3W4VSP1 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Speer3W4VSP1 0610040B10Rik-203ENSMUST00000198455 1643 ntBASIC14.14□□□□□ -0.15
Speer3W4VSP1 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Speer3W4VSP1 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Speer3W4VSP1 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Speer3W4VSP1 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Speer3W4VSP1 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.14□□□□□ -0.15
Speer3W4VSP1 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.14□□□□□ -0.15
Speer3W4VSP1 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Speer3W4VSP1 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Speer3W4VSP1 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.14□□□□□ -0.15
Speer3W4VSP1 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Speer3W4VSP1 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Speer3W4VSP1 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Speer3W4VSP1 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Speer3W4VSP1 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.14□□□□□ -0.15
Speer3W4VSP1 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Speer3W4VSP1 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Speer3W4VSP1 Grk6-205ENSMUST00000224653 2976 ntBASIC14.13□□□□□ -0.15
Speer3W4VSP1 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Speer3W4VSP1 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Speer3W4VSP1 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Speer3W4VSP1 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Speer3W4VSP1 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Speer3W4VSP1 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Speer3W4VSP1 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Speer3W4VSP1 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.13□□□□□ -0.15
Speer3W4VSP1 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Speer3W4VSP1 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Speer3W4VSP1 Gm6973-201ENSMUST00000117080 721 ntBASIC14.13□□□□□ -0.15
Speer3W4VSP1 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.13□□□□□ -0.15
Speer3W4VSP1 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.13□□□□□ -0.15
Speer3W4VSP1 Gm15483-201ENSMUST00000120338 456 ntBASIC14.13□□□□□ -0.15
Speer3W4VSP1 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.13□□□□□ -0.15
Speer3W4VSP1 Gm24513-201ENSMUST00000174964 138 ntBASIC14.13□□□□□ -0.15
Speer3W4VSP1 Gm27494-201ENSMUST00000184735 189 ntBASIC14.13□□□□□ -0.15
Speer3W4VSP1 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Speer3W4VSP1 Gm44953-201ENSMUST00000208745 1286 ntBASIC14.13□□□□□ -0.15
Speer3W4VSP1 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Speer3W4VSP1 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.13□□□□□ -0.15
Speer3W4VSP1 Gm10175-201ENSMUST00000086013 645 ntBASIC14.13□□□□□ -0.15
Speer3W4VSP1 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.13□□□□□ -0.15
Speer3W4VSP1 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Speer3W4VSP1 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.13□□□□□ -0.15
Speer3W4VSP1 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Speer3W4VSP1 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Speer3W4VSP1 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Speer3W4VSP1 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Speer3W4VSP1 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Speer3W4VSP1 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Speer3W4VSP1 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Speer3W4VSP1 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Speer3W4VSP1 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Speer3W4VSP1 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Speer3W4VSP1 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Speer3W4VSP1 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Speer3W4VSP1 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Speer3W4VSP1 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC14.13□□□□□ -0.15
Speer3W4VSP1 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Speer3W4VSP1 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Speer3W4VSP1 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms