Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cx3cr1Q9Z0D9 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cx3cr1Q9Z0D9 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cx3cr1Q9Z0D9 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cx3cr1Q9Z0D9 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC11.68□□□□□ -0.54
Cx3cr1Q9Z0D9 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cx3cr1Q9Z0D9 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cx3cr1Q9Z0D9 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 Gm9103-201ENSMUST00000119371 405 ntBASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 AC121598.1-201ENSMUST00000228224 1019 ntBASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cx3cr1Q9Z0D9 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cx3cr1Q9Z0D9 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cx3cr1Q9Z0D9 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cx3cr1Q9Z0D9 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cx3cr1Q9Z0D9 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cx3cr1Q9Z0D9 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cx3cr1Q9Z0D9 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cx3cr1Q9Z0D9 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cx3cr1Q9Z0D9 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.66□□□□□ -0.54
Cx3cr1Q9Z0D9 Gm3809-201ENSMUST00000180973 1006 ntBASIC11.66□□□□□ -0.54
Cx3cr1Q9Z0D9 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cx3cr1Q9Z0D9 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cx3cr1Q9Z0D9 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cx3cr1Q9Z0D9 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cx3cr1Q9Z0D9 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cx3cr1Q9Z0D9 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cx3cr1Q9Z0D9 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cx3cr1Q9Z0D9 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.66□□□□□ -0.54
Cx3cr1Q9Z0D9 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cx3cr1Q9Z0D9 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cx3cr1Q9Z0D9 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cx3cr1Q9Z0D9 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cx3cr1Q9Z0D9 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cx3cr1Q9Z0D9 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cx3cr1Q9Z0D9 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cx3cr1Q9Z0D9 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cx3cr1Q9Z0D9 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cx3cr1Q9Z0D9 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cx3cr1Q9Z0D9 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cx3cr1Q9Z0D9 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cx3cr1Q9Z0D9 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cx3cr1Q9Z0D9 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Cx3cr1Q9Z0D9 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cx3cr1Q9Z0D9 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.65□□□□□ -0.54
Cx3cr1Q9Z0D9 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.65□□□□□ -0.54
Cx3cr1Q9Z0D9 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cx3cr1Q9Z0D9 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cx3cr1Q9Z0D9 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.65□□□□□ -0.54
Cx3cr1Q9Z0D9 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.65□□□□□ -0.54
Cx3cr1Q9Z0D9 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cx3cr1Q9Z0D9 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cx3cr1Q9Z0D9 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Cx3cr1Q9Z0D9 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cx3cr1Q9Z0D9 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cx3cr1Q9Z0D9 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Cx3cr1Q9Z0D9 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cx3cr1Q9Z0D9 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms