Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf3Q9QXK7 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf3Q9QXK7 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Cpsf3Q9QXK7 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf3Q9QXK7 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf3Q9QXK7 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.82□□□□□ -0.04
Cpsf3Q9QXK7 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf3Q9QXK7 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.82□□□□□ -0.04
Cpsf3Q9QXK7 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.82□□□□□ -0.04
Cpsf3Q9QXK7 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.82□□□□□ -0.04
Cpsf3Q9QXK7 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf3Q9QXK7 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf3Q9QXK7 Gm6180-201ENSMUST00000065243 498 ntBASIC14.82□□□□□ -0.04
Cpsf3Q9QXK7 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf3Q9QXK7 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Cpsf3Q9QXK7 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf3Q9QXK7 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf3Q9QXK7 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf3Q9QXK7 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf3Q9QXK7 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf3Q9QXK7 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf3Q9QXK7 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.82□□□□□ -0.04
Cpsf3Q9QXK7 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf3Q9QXK7 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf3Q9QXK7 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf3Q9QXK7 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf3Q9QXK7 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf3Q9QXK7 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf3Q9QXK7 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf3Q9QXK7 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf3Q9QXK7 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf3Q9QXK7 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf3Q9QXK7 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf3Q9QXK7 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf3Q9QXK7 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf3Q9QXK7 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf3Q9QXK7 Gm11524-201ENSMUST00000119349 807 ntBASIC14.81□□□□□ -0.04
Cpsf3Q9QXK7 Gm15376-201ENSMUST00000122258 783 ntBASIC14.81□□□□□ -0.04
Cpsf3Q9QXK7 Gm26464-201ENSMUST00000157094 305 ntBASIC14.81□□□□□ -0.04
Cpsf3Q9QXK7 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.81□□□□□ -0.04
Cpsf3Q9QXK7 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.81□□□□□ -0.04
Cpsf3Q9QXK7 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf3Q9QXK7 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Cpsf3Q9QXK7 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf3Q9QXK7 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf3Q9QXK7 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.81□□□□□ -0.04
Cpsf3Q9QXK7 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.81□□□□□ -0.04
Cpsf3Q9QXK7 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf3Q9QXK7 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Cpsf3Q9QXK7 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Cpsf3Q9QXK7 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Cpsf3Q9QXK7 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.8□□□□□ -0.04
Cpsf3Q9QXK7 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Cpsf3Q9QXK7 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf3Q9QXK7 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf3Q9QXK7 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf3Q9QXK7 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cpsf3Q9QXK7 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf3Q9QXK7 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
Cpsf3Q9QXK7 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf3Q9QXK7 Gm23984-201ENSMUST00000157139 203 ntBASIC14.8□□□□□ -0.04
Cpsf3Q9QXK7 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.8□□□□□ -0.04
Cpsf3Q9QXK7 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Cpsf3Q9QXK7 Mir7654-201ENSMUST00000185082 70 ntBASIC14.8□□□□□ -0.04
Cpsf3Q9QXK7 Gm8515-201ENSMUST00000194852 576 ntBASIC14.8□□□□□ -0.04
Cpsf3Q9QXK7 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.8□□□□□ -0.04
Cpsf3Q9QXK7 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf3Q9QXK7 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf3Q9QXK7 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Cpsf3Q9QXK7 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf3Q9QXK7 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf3Q9QXK7 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf3Q9QXK7 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Cpsf3Q9QXK7 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Cpsf3Q9QXK7 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.8□□□□□ -0.04
Cpsf3Q9QXK7 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf3Q9QXK7 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf3Q9QXK7 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf3Q9QXK7 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf3Q9QXK7 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf3Q9QXK7 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cpsf3Q9QXK7 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf3Q9QXK7 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf3Q9QXK7 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf3Q9QXK7 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf3Q9QXK7 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Cpsf3Q9QXK7 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.79□□□□□ -0.04
Cpsf3Q9QXK7 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Cpsf3Q9QXK7 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf3Q9QXK7 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf3Q9QXK7 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf3Q9QXK7 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.79□□□□□ -0.04
Cpsf3Q9QXK7 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.79□□□□□ -0.04
Cpsf3Q9QXK7 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf3Q9QXK7 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf3Q9QXK7 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf3Q9QXK7 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Cpsf3Q9QXK7 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.79□□□□□ -0.04
Cpsf3Q9QXK7 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.79□□□□□ -0.04
Cpsf3Q9QXK7 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms