Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Cpsf1Q9EPU4 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cpsf1Q9EPU4 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Cpsf1Q9EPU4 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cpsf1Q9EPU4 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cpsf1Q9EPU4 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cpsf1Q9EPU4 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cpsf1Q9EPU4 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cpsf1Q9EPU4 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cpsf1Q9EPU4 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC18.83■□□□□ 0.6
Cpsf1Q9EPU4 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC18.83■□□□□ 0.6
Cpsf1Q9EPU4 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cpsf1Q9EPU4 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cpsf1Q9EPU4 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cpsf1Q9EPU4 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cpsf1Q9EPU4 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cpsf1Q9EPU4 Gm42769-201ENSMUST00000198576 1659 ntBASIC18.82■□□□□ 0.6
Cpsf1Q9EPU4 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cpsf1Q9EPU4 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cpsf1Q9EPU4 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cpsf1Q9EPU4 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Cpsf1Q9EPU4 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Cpsf1Q9EPU4 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cpsf1Q9EPU4 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC18.82■□□□□ 0.6
Cpsf1Q9EPU4 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cpsf1Q9EPU4 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cpsf1Q9EPU4 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC18.82■□□□□ 0.6
Cpsf1Q9EPU4 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cpsf1Q9EPU4 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cpsf1Q9EPU4 Gm4271-201ENSMUST00000174444 973 ntBASIC18.82■□□□□ 0.6
Cpsf1Q9EPU4 Gm9124-201ENSMUST00000191789 1092 ntBASIC18.82■□□□□ 0.6
Cpsf1Q9EPU4 Gm9113-201ENSMUST00000192510 1018 ntBASIC18.82■□□□□ 0.6
Cpsf1Q9EPU4 Gm9131-201ENSMUST00000193557 1089 ntBASIC18.82■□□□□ 0.6
Cpsf1Q9EPU4 Gm9121-201ENSMUST00000193749 1071 ntBASIC18.82■□□□□ 0.6
Cpsf1Q9EPU4 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC18.82■□□□□ 0.6
Cpsf1Q9EPU4 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cpsf1Q9EPU4 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cpsf1Q9EPU4 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cpsf1Q9EPU4 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpsf1Q9EPU4 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cpsf1Q9EPU4 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Cpsf1Q9EPU4 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpsf1Q9EPU4 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpsf1Q9EPU4 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC18.81■□□□□ 0.6
Cpsf1Q9EPU4 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cpsf1Q9EPU4 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpsf1Q9EPU4 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Cpsf1Q9EPU4 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Cpsf1Q9EPU4 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cpsf1Q9EPU4 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC18.81■□□□□ 0.6
Cpsf1Q9EPU4 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Cpsf1Q9EPU4 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC18.81■□□□□ 0.6
Cpsf1Q9EPU4 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
Cpsf1Q9EPU4 AC166491.1-201ENSMUST00000227053 2308 ntBASIC18.81■□□□□ 0.6
Cpsf1Q9EPU4 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpsf1Q9EPU4 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpsf1Q9EPU4 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpsf1Q9EPU4 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpsf1Q9EPU4 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cpsf1Q9EPU4 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpsf1Q9EPU4 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpsf1Q9EPU4 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cpsf1Q9EPU4 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cpsf1Q9EPU4 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Cpsf1Q9EPU4 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cpsf1Q9EPU4 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Cpsf1Q9EPU4 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Cpsf1Q9EPU4 Gm11618-201ENSMUST00000117946 267 ntBASIC18.8■□□□□ 0.6
Cpsf1Q9EPU4 Gm13123-201ENSMUST00000122173 492 ntBASIC18.8■□□□□ 0.6
Cpsf1Q9EPU4 Gm44069-201ENSMUST00000204898 506 ntBASIC18.8■□□□□ 0.6
Cpsf1Q9EPU4 Gm9299-201ENSMUST00000206392 1140 ntBASIC18.8■□□□□ 0.6
Cpsf1Q9EPU4 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cpsf1Q9EPU4 Gm10478-201ENSMUST00000084451 396 ntBASIC18.8■□□□□ 0.6
Cpsf1Q9EPU4 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cpsf1Q9EPU4 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cpsf1Q9EPU4 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cpsf1Q9EPU4 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cpsf1Q9EPU4 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cpsf1Q9EPU4 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC18.79■□□□□ 0.6
Cpsf1Q9EPU4 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cpsf1Q9EPU4 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cpsf1Q9EPU4 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cpsf1Q9EPU4 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cpsf1Q9EPU4 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cpsf1Q9EPU4 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cpsf1Q9EPU4 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC18.79■□□□□ 0.6
Cpsf1Q9EPU4 Gm22331-201ENSMUST00000158066 136 ntBASIC18.79■□□□□ 0.6
Cpsf1Q9EPU4 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cpsf1Q9EPU4 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cpsf1Q9EPU4 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC18.79■□□□□ 0.6
Cpsf1Q9EPU4 Gm42693-201ENSMUST00000196779 631 ntBASIC18.79■□□□□ 0.6
Cpsf1Q9EPU4 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cpsf1Q9EPU4 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC18.79■□□□□ 0.6
Cpsf1Q9EPU4 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC18.79■□□□□ 0.6
Cpsf1Q9EPU4 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cpsf1Q9EPU4 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cpsf1Q9EPU4 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Cpsf1Q9EPU4 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpsf1Q9EPU4 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpsf1Q9EPU4 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms