Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
U2af1Q9D883 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
U2af1Q9D883 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
U2af1Q9D883 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
U2af1Q9D883 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
U2af1Q9D883 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
U2af1Q9D883 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
U2af1Q9D883 Gm12485-201ENSMUST00000119641 291 ntBASIC18.12■□□□□ 0.49
U2af1Q9D883 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC18.12■□□□□ 0.49
U2af1Q9D883 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC18.12■□□□□ 0.49
U2af1Q9D883 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC18.12■□□□□ 0.49
U2af1Q9D883 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC18.12■□□□□ 0.49
U2af1Q9D883 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
U2af1Q9D883 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
U2af1Q9D883 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
U2af1Q9D883 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
U2af1Q9D883 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
U2af1Q9D883 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
U2af1Q9D883 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC18.12■□□□□ 0.49
U2af1Q9D883 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
U2af1Q9D883 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
U2af1Q9D883 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
U2af1Q9D883 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
U2af1Q9D883 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
U2af1Q9D883 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
U2af1Q9D883 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
U2af1Q9D883 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
U2af1Q9D883 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC18.11■□□□□ 0.49
U2af1Q9D883 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
U2af1Q9D883 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
U2af1Q9D883 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
U2af1Q9D883 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC18.11■□□□□ 0.49
U2af1Q9D883 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
U2af1Q9D883 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
U2af1Q9D883 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC18.11■□□□□ 0.49
U2af1Q9D883 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC18.11■□□□□ 0.49
U2af1Q9D883 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC18.11■□□□□ 0.49
U2af1Q9D883 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
U2af1Q9D883 Gm18934-201ENSMUST00000216671 1044 ntBASIC18.11■□□□□ 0.49
U2af1Q9D883 AC162801.1-201ENSMUST00000220612 198 ntBASIC18.11■□□□□ 0.49
U2af1Q9D883 AC192088.1-201ENSMUST00000227561 301 ntBASIC18.11■□□□□ 0.49
U2af1Q9D883 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
U2af1Q9D883 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
U2af1Q9D883 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
U2af1Q9D883 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
U2af1Q9D883 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
U2af1Q9D883 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
U2af1Q9D883 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
U2af1Q9D883 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
U2af1Q9D883 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
U2af1Q9D883 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
U2af1Q9D883 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
U2af1Q9D883 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
U2af1Q9D883 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
U2af1Q9D883 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
U2af1Q9D883 Gm21038-201ENSMUST00000222205 1383 ntBASIC18.1■□□□□ 0.49
U2af1Q9D883 Gm11918-201ENSMUST00000121660 179 ntBASIC18.1■□□□□ 0.49
U2af1Q9D883 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
U2af1Q9D883 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC18.1■□□□□ 0.49
U2af1Q9D883 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC18.1■□□□□ 0.49
U2af1Q9D883 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC18.1■□□□□ 0.49
U2af1Q9D883 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
U2af1Q9D883 Gm5069-202ENSMUST00000192714 1011 ntBASIC18.1■□□□□ 0.49
U2af1Q9D883 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC18.1■□□□□ 0.49
U2af1Q9D883 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
U2af1Q9D883 Gm7446-201ENSMUST00000221035 1240 ntBASIC18.1■□□□□ 0.49
U2af1Q9D883 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
U2af1Q9D883 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
U2af1Q9D883 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
U2af1Q9D883 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
U2af1Q9D883 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
U2af1Q9D883 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
U2af1Q9D883 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC18.1■□□□□ 0.49
U2af1Q9D883 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
U2af1Q9D883 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
U2af1Q9D883 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
U2af1Q9D883 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
U2af1Q9D883 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
U2af1Q9D883 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
U2af1Q9D883 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
U2af1Q9D883 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
U2af1Q9D883 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
U2af1Q9D883 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
U2af1Q9D883 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
U2af1Q9D883 AC131997.1-201ENSMUST00000228611 1229 ntBASIC18.09■□□□□ 0.49
U2af1Q9D883 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
U2af1Q9D883 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
U2af1Q9D883 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
U2af1Q9D883 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
U2af1Q9D883 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC18.09■□□□□ 0.49
U2af1Q9D883 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
U2af1Q9D883 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
U2af1Q9D883 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
U2af1Q9D883 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
U2af1Q9D883 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
U2af1Q9D883 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC18.08■□□□□ 0.49
U2af1Q9D883 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
U2af1Q9D883 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
U2af1Q9D883 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
U2af1Q9D883 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms