Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 AC154747.3-201ENSMUST00000224471 3470 ntBASIC16.51■□□□□ 0.23
Chmp4cQ9D7F7 Gm45751-201ENSMUST00000210185 1573 ntBASIC16.51■□□□□ 0.23
Chmp4cQ9D7F7 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
Chmp4cQ9D7F7 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp4cQ9D7F7 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.51■□□□□ 0.23
Chmp4cQ9D7F7 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Chmp4cQ9D7F7 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp4cQ9D7F7 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp4cQ9D7F7 Gm15957-201ENSMUST00000118893 974 ntBASIC16.51■□□□□ 0.23
Chmp4cQ9D7F7 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Chmp4cQ9D7F7 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.51■□□□□ 0.23
Chmp4cQ9D7F7 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp4cQ9D7F7 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp4cQ9D7F7 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Chmp4cQ9D7F7 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC16.51■□□□□ 0.23
Chmp4cQ9D7F7 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp4cQ9D7F7 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp4cQ9D7F7 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Chmp4cQ9D7F7 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp4cQ9D7F7 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp4cQ9D7F7 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp4cQ9D7F7 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp4cQ9D7F7 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp4cQ9D7F7 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp4cQ9D7F7 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp4cQ9D7F7 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp4cQ9D7F7 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Chmp4cQ9D7F7 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp4cQ9D7F7 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp4cQ9D7F7 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp4cQ9D7F7 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC16.5■□□□□ 0.23
Chmp4cQ9D7F7 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Chmp4cQ9D7F7 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp4cQ9D7F7 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Chmp4cQ9D7F7 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Chmp4cQ9D7F7 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Chmp4cQ9D7F7 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp4cQ9D7F7 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp4cQ9D7F7 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp4cQ9D7F7 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.5■□□□□ 0.23
Chmp4cQ9D7F7 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp4cQ9D7F7 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp4cQ9D7F7 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.5■□□□□ 0.23
Chmp4cQ9D7F7 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC16.5■□□□□ 0.23
Chmp4cQ9D7F7 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp4cQ9D7F7 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp4cQ9D7F7 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp4cQ9D7F7 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp4cQ9D7F7 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp4cQ9D7F7 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp4cQ9D7F7 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp4cQ9D7F7 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Chmp4cQ9D7F7 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp4cQ9D7F7 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp4cQ9D7F7 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp4cQ9D7F7 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Chmp4cQ9D7F7 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp4cQ9D7F7 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
Chmp4cQ9D7F7 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp4cQ9D7F7 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.5■□□□□ 0.23
Chmp4cQ9D7F7 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp4cQ9D7F7 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Chmp4cQ9D7F7 Gm38197-201ENSMUST00000192320 2122 ntBASIC16.49■□□□□ 0.23
Chmp4cQ9D7F7 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC16.49■□□□□ 0.23
Chmp4cQ9D7F7 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp4cQ9D7F7 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp4cQ9D7F7 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp4cQ9D7F7 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp4cQ9D7F7 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Chmp4cQ9D7F7 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp4cQ9D7F7 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp4cQ9D7F7 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Chmp4cQ9D7F7 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Chmp4cQ9D7F7 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp4cQ9D7F7 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp4cQ9D7F7 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Chmp4cQ9D7F7 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp4cQ9D7F7 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.49■□□□□ 0.23
Chmp4cQ9D7F7 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC16.49■□□□□ 0.23
Chmp4cQ9D7F7 Gm9824-201ENSMUST00000178707 561 ntBASIC16.49■□□□□ 0.23
Chmp4cQ9D7F7 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC16.49■□□□□ 0.23
Chmp4cQ9D7F7 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp4cQ9D7F7 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.49■□□□□ 0.23
Chmp4cQ9D7F7 Gm45453-201ENSMUST00000211758 853 ntBASIC16.49■□□□□ 0.23
Chmp4cQ9D7F7 CT030704.2-201ENSMUST00000228887 494 ntBASIC16.49■□□□□ 0.23
Chmp4cQ9D7F7 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Chmp4cQ9D7F7 Gm9947-201ENSMUST00000067599 2920 ntBASIC16.49■□□□□ 0.23
Chmp4cQ9D7F7 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Chmp4cQ9D7F7 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp4cQ9D7F7 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp4cQ9D7F7 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Chmp4cQ9D7F7 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp4cQ9D7F7 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp4cQ9D7F7 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp4cQ9D7F7 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp4cQ9D7F7 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC16.49■□□□□ 0.23
Chmp4cQ9D7F7 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp4cQ9D7F7 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp4cQ9D7F7 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp4cQ9D7F7 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 95.5 ms