Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ssr1Q9CY50 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ssr1Q9CY50 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC15.01□□□□□ -0.01
Ssr1Q9CY50 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ssr1Q9CY50 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ssr1Q9CY50 Gm2810-201ENSMUST00000118681 990 ntBASIC15.01□□□□□ -0.01
Ssr1Q9CY50 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ssr1Q9CY50 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.01□□□□□ -0.01
Ssr1Q9CY50 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ssr1Q9CY50 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Ssr1Q9CY50 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ssr1Q9CY50 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ssr1Q9CY50 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC15.01□□□□□ -0.01
Ssr1Q9CY50 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ssr1Q9CY50 AC117194.1-201ENSMUST00000224847 3002 ntBASIC15.01□□□□□ -0.01
Ssr1Q9CY50 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ssr1Q9CY50 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ssr1Q9CY50 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Ssr1Q9CY50 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ssr1Q9CY50 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ssr1Q9CY50 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ssr1Q9CY50 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ssr1Q9CY50 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ssr1Q9CY50 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ssr1Q9CY50 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ssr1Q9CY50 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ssr1Q9CY50 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ssr1Q9CY50 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ssr1Q9CY50 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ssr1Q9CY50 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ssr1Q9CY50 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15□□□□□ -0.01
Ssr1Q9CY50 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ssr1Q9CY50 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Ssr1Q9CY50 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ssr1Q9CY50 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ssr1Q9CY50 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Ssr1Q9CY50 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ssr1Q9CY50 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Ssr1Q9CY50 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC15□□□□□ -0.01
Ssr1Q9CY50 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15□□□□□ -0.01
Ssr1Q9CY50 AC123645.1-201ENSMUST00000228469 605 ntBASIC15□□□□□ -0.01
Ssr1Q9CY50 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ssr1Q9CY50 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15□□□□□ -0.01
Ssr1Q9CY50 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC15□□□□□ -0.01
Ssr1Q9CY50 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ssr1Q9CY50 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ssr1Q9CY50 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ssr1Q9CY50 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ssr1Q9CY50 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ssr1Q9CY50 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Ssr1Q9CY50 Il17rd-203ENSMUST00000225146 3366 ntBASIC15□□□□□ -0.01
Ssr1Q9CY50 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ssr1Q9CY50 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ssr1Q9CY50 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Ssr1Q9CY50 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Ssr1Q9CY50 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ssr1Q9CY50 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ssr1Q9CY50 Gm20632-201ENSMUST00000176760 2427 ntBASIC15□□□□□ -0.01
Ssr1Q9CY50 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ssr1Q9CY50 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ssr1Q9CY50 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ssr1Q9CY50 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ssr1Q9CY50 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ssr1Q9CY50 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ssr1Q9CY50 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Ssr1Q9CY50 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ssr1Q9CY50 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ssr1Q9CY50 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Ssr1Q9CY50 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ssr1Q9CY50 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.99□□□□□ -0.01
Ssr1Q9CY50 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ssr1Q9CY50 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ssr1Q9CY50 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Ssr1Q9CY50 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Ssr1Q9CY50 Gm45011-201ENSMUST00000207620 2297 ntBASIC14.99□□□□□ -0.01
Ssr1Q9CY50 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ssr1Q9CY50 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ssr1Q9CY50 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.99□□□□□ -0.01
Ssr1Q9CY50 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.99□□□□□ -0.01
Ssr1Q9CY50 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.99□□□□□ -0.01
Ssr1Q9CY50 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ssr1Q9CY50 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Ssr1Q9CY50 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.99□□□□□ -0.01
Ssr1Q9CY50 Gm45612-201ENSMUST00000211320 160 ntBASIC14.99□□□□□ -0.01
Ssr1Q9CY50 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.99□□□□□ -0.01
Ssr1Q9CY50 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.99□□□□□ -0.01
Ssr1Q9CY50 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ssr1Q9CY50 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ssr1Q9CY50 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ssr1Q9CY50 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ssr1Q9CY50 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ssr1Q9CY50 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ssr1Q9CY50 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ssr1Q9CY50 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.99□□□□□ -0.01
Ssr1Q9CY50 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Ssr1Q9CY50 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.99□□□□□ -0.01
Ssr1Q9CY50 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ssr1Q9CY50 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.99□□□□□ -0.01
Ssr1Q9CY50 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ssr1Q9CY50 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms