Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.96□□□□□ -0.33
Ddx28Q9CWT6 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.96□□□□□ -0.33
Ddx28Q9CWT6 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.96□□□□□ -0.33
Ddx28Q9CWT6 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.96□□□□□ -0.33
Ddx28Q9CWT6 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.96□□□□□ -0.33
Ddx28Q9CWT6 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ddx28Q9CWT6 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Ddx28Q9CWT6 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ddx28Q9CWT6 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ddx28Q9CWT6 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ddx28Q9CWT6 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ddx28Q9CWT6 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.96□□□□□ -0.34
Ddx28Q9CWT6 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ddx28Q9CWT6 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx28Q9CWT6 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx28Q9CWT6 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx28Q9CWT6 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ddx28Q9CWT6 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.95□□□□□ -0.34
Ddx28Q9CWT6 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx28Q9CWT6 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Ddx28Q9CWT6 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
Ddx28Q9CWT6 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx28Q9CWT6 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.95□□□□□ -0.34
Ddx28Q9CWT6 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ddx28Q9CWT6 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx28Q9CWT6 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx28Q9CWT6 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx28Q9CWT6 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.95□□□□□ -0.34
Ddx28Q9CWT6 Gm2810-201ENSMUST00000118681 990 ntBASIC12.95□□□□□ -0.34
Ddx28Q9CWT6 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.95□□□□□ -0.34
Ddx28Q9CWT6 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx28Q9CWT6 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.95□□□□□ -0.34
Ddx28Q9CWT6 Gm10275-202ENSMUST00000168697 495 ntBASIC12.95□□□□□ -0.34
Ddx28Q9CWT6 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ddx28Q9CWT6 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ddx28Q9CWT6 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Ddx28Q9CWT6 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.95□□□□□ -0.34
Ddx28Q9CWT6 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx28Q9CWT6 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx28Q9CWT6 Gm10275-201ENSMUST00000092620 635 ntBASIC12.95□□□□□ -0.34
Ddx28Q9CWT6 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx28Q9CWT6 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Ddx28Q9CWT6 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ddx28Q9CWT6 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.95□□□□□ -0.34
Ddx28Q9CWT6 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ddx28Q9CWT6 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx28Q9CWT6 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx28Q9CWT6 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx28Q9CWT6 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx28Q9CWT6 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ddx28Q9CWT6 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx28Q9CWT6 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.94□□□□□ -0.34
Ddx28Q9CWT6 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.94□□□□□ -0.34
Ddx28Q9CWT6 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.94□□□□□ -0.34
Ddx28Q9CWT6 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx28Q9CWT6 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.94□□□□□ -0.34
Ddx28Q9CWT6 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx28Q9CWT6 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx28Q9CWT6 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ddx28Q9CWT6 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
Ddx28Q9CWT6 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx28Q9CWT6 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx28Q9CWT6 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Ddx28Q9CWT6 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.94□□□□□ -0.34
Ddx28Q9CWT6 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.94□□□□□ -0.34
Ddx28Q9CWT6 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Ddx28Q9CWT6 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.94□□□□□ -0.34
Ddx28Q9CWT6 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.94□□□□□ -0.34
Ddx28Q9CWT6 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx28Q9CWT6 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.94□□□□□ -0.34
Ddx28Q9CWT6 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ddx28Q9CWT6 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx28Q9CWT6 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ddx28Q9CWT6 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx28Q9CWT6 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx28Q9CWT6 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.94□□□□□ -0.34
Ddx28Q9CWT6 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ddx28Q9CWT6 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx28Q9CWT6 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx28Q9CWT6 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx28Q9CWT6 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx28Q9CWT6 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx28Q9CWT6 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx28Q9CWT6 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx28Q9CWT6 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx28Q9CWT6 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx28Q9CWT6 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx28Q9CWT6 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx28Q9CWT6 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.93□□□□□ -0.34
Ddx28Q9CWT6 Gm11745-201ENSMUST00000121669 448 ntBASIC12.93□□□□□ -0.34
Ddx28Q9CWT6 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx28Q9CWT6 Rprl2-201ENSMUST00000157150 290 ntBASIC12.93□□□□□ -0.34
Ddx28Q9CWT6 Gm27494-201ENSMUST00000184735 189 ntBASIC12.93□□□□□ -0.34
Ddx28Q9CWT6 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx28Q9CWT6 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.93□□□□□ -0.34
Ddx28Q9CWT6 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx28Q9CWT6 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx28Q9CWT6 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.93□□□□□ -0.34
Ddx28Q9CWT6 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.93□□□□□ -0.34
Ddx28Q9CWT6 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms