Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retreg3Q9CQV4 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retreg3Q9CQV4 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retreg3Q9CQV4 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retreg3Q9CQV4 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Retreg3Q9CQV4 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retreg3Q9CQV4 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retreg3Q9CQV4 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retreg3Q9CQV4 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retreg3Q9CQV4 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retreg3Q9CQV4 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retreg3Q9CQV4 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retreg3Q9CQV4 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Retreg3Q9CQV4 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retreg3Q9CQV4 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retreg3Q9CQV4 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retreg3Q9CQV4 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Retreg3Q9CQV4 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.02□□□□□ -0.16
Retreg3Q9CQV4 AC136019.1-201ENSMUST00000226503 1412 ntBASIC14.02□□□□□ -0.16
Retreg3Q9CQV4 Gm42479-201ENSMUST00000198654 1356 ntBASIC14.02□□□□□ -0.17
Retreg3Q9CQV4 Olfr282-203ENSMUST00000213608 1374 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Retreg3Q9CQV4 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retreg3Q9CQV4 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Retreg3Q9CQV4 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.02□□□□□ -0.17
Retreg3Q9CQV4 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.02□□□□□ -0.17
Retreg3Q9CQV4 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.02□□□□□ -0.17
Retreg3Q9CQV4 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Retreg3Q9CQV4 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Retreg3Q9CQV4 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retreg3Q9CQV4 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Retreg3Q9CQV4 Celrr-201ENSMUST00000181183 1194 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Retreg3Q9CQV4 Gm27838-201ENSMUST00000184829 128 ntBASIC14.02□□□□□ -0.17
Retreg3Q9CQV4 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.02□□□□□ -0.17
Retreg3Q9CQV4 CT025642.1-201ENSMUST00000224734 1219 ntBASIC14.02□□□□□ -0.17
Retreg3Q9CQV4 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retreg3Q9CQV4 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Retreg3Q9CQV4 Gm2423-201ENSMUST00000074863 733 ntBASIC14.02□□□□□ -0.17
Retreg3Q9CQV4 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.02□□□□□ -0.17
Retreg3Q9CQV4 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retreg3Q9CQV4 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Retreg3Q9CQV4 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retreg3Q9CQV4 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retreg3Q9CQV4 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retreg3Q9CQV4 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retreg3Q9CQV4 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Retreg3Q9CQV4 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Gm8581-201ENSMUST00000188636 890 ntBASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Gm18944-201ENSMUST00000207672 643 ntBASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Gm14005-208ENSMUST00000223654 681 ntBASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 CT009711.2-202ENSMUST00000224538 973 ntBASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 AC154848.1-201ENSMUST00000225451 846 ntBASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retreg3Q9CQV4 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retreg3Q9CQV4 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retreg3Q9CQV4 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms