Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chchd1Q9CQA6 Gm4780-202ENSMUST00000215200 2644 ntBASIC10.36□□□□□ -0.75
Chchd1Q9CQA6 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chchd1Q9CQA6 Gm15593-201ENSMUST00000122085 1008 ntBASIC10.36□□□□□ -0.75
Chchd1Q9CQA6 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Chchd1Q9CQA6 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC10.36□□□□□ -0.75
Chchd1Q9CQA6 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC10.36□□□□□ -0.75
Chchd1Q9CQA6 Gm4691-201ENSMUST00000182339 1000 ntBASIC10.36□□□□□ -0.75
Chchd1Q9CQA6 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Chchd1Q9CQA6 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC10.36□□□□□ -0.75
Chchd1Q9CQA6 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Chchd1Q9CQA6 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chchd1Q9CQA6 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chchd1Q9CQA6 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Chchd1Q9CQA6 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chchd1Q9CQA6 AC115735.4-201ENSMUST00000227460 1944 ntBASIC10.36□□□□□ -0.75
Chchd1Q9CQA6 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chchd1Q9CQA6 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chchd1Q9CQA6 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Chchd1Q9CQA6 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Chchd1Q9CQA6 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chchd1Q9CQA6 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chchd1Q9CQA6 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chchd1Q9CQA6 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chchd1Q9CQA6 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chchd1Q9CQA6 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Chchd1Q9CQA6 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chchd1Q9CQA6 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Chchd1Q9CQA6 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chchd1Q9CQA6 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chchd1Q9CQA6 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Chchd1Q9CQA6 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Gm27389-201ENSMUST00000183622 195 ntBASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Chchd1Q9CQA6 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Chchd1Q9CQA6 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.34□□□□□ -0.75
Chchd1Q9CQA6 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Chchd1Q9CQA6 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Chchd1Q9CQA6 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Chchd1Q9CQA6 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Chchd1Q9CQA6 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Chchd1Q9CQA6 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Chchd1Q9CQA6 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Chchd1Q9CQA6 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Chchd1Q9CQA6 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.34□□□□□ -0.75
Chchd1Q9CQA6 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Chchd1Q9CQA6 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Chchd1Q9CQA6 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Chchd1Q9CQA6 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Chchd1Q9CQA6 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Chchd1Q9CQA6 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Chchd1Q9CQA6 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Chchd1Q9CQA6 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Chchd1Q9CQA6 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Chchd1Q9CQA6 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Chchd1Q9CQA6 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
Chchd1Q9CQA6 Gm13312-201ENSMUST00000119631 718 ntBASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms