Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Ska1Q9CPV1 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Ska1Q9CPV1 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ska1Q9CPV1 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ska1Q9CPV1 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ska1Q9CPV1 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ska1Q9CPV1 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ska1Q9CPV1 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ska1Q9CPV1 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ska1Q9CPV1 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ska1Q9CPV1 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Ska1Q9CPV1 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ska1Q9CPV1 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ska1Q9CPV1 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.04□□□□□ -0.32
Ska1Q9CPV1 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Ska1Q9CPV1 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ska1Q9CPV1 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ska1Q9CPV1 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ska1Q9CPV1 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ska1Q9CPV1 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ska1Q9CPV1 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ska1Q9CPV1 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ska1Q9CPV1 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.04□□□□□ -0.32
Ska1Q9CPV1 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.04□□□□□ -0.32
Ska1Q9CPV1 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ska1Q9CPV1 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.04□□□□□ -0.32
Ska1Q9CPV1 Gm18057-201ENSMUST00000208220 503 ntBASIC13.04□□□□□ -0.32
Ska1Q9CPV1 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Ska1Q9CPV1 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ska1Q9CPV1 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ska1Q9CPV1 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ska1Q9CPV1 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ska1Q9CPV1 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ska1Q9CPV1 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ska1Q9CPV1 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Ska1Q9CPV1 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ska1Q9CPV1 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ska1Q9CPV1 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ska1Q9CPV1 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ska1Q9CPV1 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ska1Q9CPV1 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ska1Q9CPV1 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ska1Q9CPV1 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Ska1Q9CPV1 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Ska1Q9CPV1 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ska1Q9CPV1 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ska1Q9CPV1 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.03□□□□□ -0.32
Ska1Q9CPV1 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ska1Q9CPV1 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ska1Q9CPV1 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Ska1Q9CPV1 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.03□□□□□ -0.32
Ska1Q9CPV1 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ska1Q9CPV1 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ska1Q9CPV1 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.03□□□□□ -0.32
Ska1Q9CPV1 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ska1Q9CPV1 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ska1Q9CPV1 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.03□□□□□ -0.32
Ska1Q9CPV1 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ska1Q9CPV1 Gm12882-201ENSMUST00000121696 517 ntBASIC13.03□□□□□ -0.32
Ska1Q9CPV1 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ska1Q9CPV1 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ska1Q9CPV1 Gm5264-201ENSMUST00000190584 848 ntBASIC13.03□□□□□ -0.32
Ska1Q9CPV1 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.03□□□□□ -0.32
Ska1Q9CPV1 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.03□□□□□ -0.32
Ska1Q9CPV1 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.03□□□□□ -0.32
Ska1Q9CPV1 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ska1Q9CPV1 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Ska1Q9CPV1 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ska1Q9CPV1 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ska1Q9CPV1 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ska1Q9CPV1 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ska1Q9CPV1 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ska1Q9CPV1 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ska1Q9CPV1 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Ska1Q9CPV1 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ska1Q9CPV1 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ska1Q9CPV1 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ska1Q9CPV1 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ska1Q9CPV1 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ska1Q9CPV1 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ska1Q9CPV1 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ska1Q9CPV1 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ska1Q9CPV1 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ska1Q9CPV1 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ska1Q9CPV1 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.02□□□□□ -0.32
Ska1Q9CPV1 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ska1Q9CPV1 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ska1Q9CPV1 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ska1Q9CPV1 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.02□□□□□ -0.32
Ska1Q9CPV1 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ska1Q9CPV1 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
Ska1Q9CPV1 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ska1Q9CPV1 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ska1Q9CPV1 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ska1Q9CPV1 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ska1Q9CPV1 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ska1Q9CPV1 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ska1Q9CPV1 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ska1Q9CPV1 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ska1Q9CPV1 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms