Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim16Q99PP9 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trim16Q99PP9 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim16Q99PP9 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim16Q99PP9 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim16Q99PP9 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim16Q99PP9 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim16Q99PP9 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim16Q99PP9 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim16Q99PP9 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.53□□□□□ -0.24
Trim16Q99PP9 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trim16Q99PP9 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.53□□□□□ -0.24
Trim16Q99PP9 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim16Q99PP9 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim16Q99PP9 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim16Q99PP9 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trim16Q99PP9 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim16Q99PP9 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim16Q99PP9 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trim16Q99PP9 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.52□□□□□ -0.24
Trim16Q99PP9 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim16Q99PP9 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim16Q99PP9 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.52□□□□□ -0.25
Trim16Q99PP9 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim16Q99PP9 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.52□□□□□ -0.25
Trim16Q99PP9 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.52□□□□□ -0.25
Trim16Q99PP9 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim16Q99PP9 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim16Q99PP9 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim16Q99PP9 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.52□□□□□ -0.25
Trim16Q99PP9 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim16Q99PP9 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trim16Q99PP9 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim16Q99PP9 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim16Q99PP9 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim16Q99PP9 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim16Q99PP9 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim16Q99PP9 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim16Q99PP9 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim16Q99PP9 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim16Q99PP9 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim16Q99PP9 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim16Q99PP9 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim16Q99PP9 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim16Q99PP9 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trim16Q99PP9 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim16Q99PP9 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim16Q99PP9 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim16Q99PP9 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim16Q99PP9 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Trim16Q99PP9 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim16Q99PP9 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim16Q99PP9 Gm27631-201ENSMUST00000184163 466 ntBASIC13.51□□□□□ -0.25
Trim16Q99PP9 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim16Q99PP9 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim16Q99PP9 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trim16Q99PP9 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim16Q99PP9 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim16Q99PP9 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim16Q99PP9 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
Trim16Q99PP9 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trim16Q99PP9 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim16Q99PP9 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim16Q99PP9 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trim16Q99PP9 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim16Q99PP9 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim16Q99PP9 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim16Q99PP9 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim16Q99PP9 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim16Q99PP9 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim16Q99PP9 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim16Q99PP9 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim16Q99PP9 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.5□□□□□ -0.25
Trim16Q99PP9 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.5□□□□□ -0.25
Trim16Q99PP9 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim16Q99PP9 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim16Q99PP9 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trim16Q99PP9 Gm8410-201ENSMUST00000117225 605 ntBASIC13.5□□□□□ -0.25
Trim16Q99PP9 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim16Q99PP9 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.5□□□□□ -0.25
Trim16Q99PP9 Mir6956-201ENSMUST00000183598 62 ntBASIC13.5□□□□□ -0.25
Trim16Q99PP9 Gm45453-201ENSMUST00000211758 853 ntBASIC13.5□□□□□ -0.25
Trim16Q99PP9 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.5□□□□□ -0.25
Trim16Q99PP9 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim16Q99PP9 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim16Q99PP9 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trim16Q99PP9 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim16Q99PP9 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim16Q99PP9 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim16Q99PP9 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim16Q99PP9 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim16Q99PP9 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim16Q99PP9 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim16Q99PP9 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.5□□□□□ -0.25
Trim16Q99PP9 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trim16Q99PP9 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim16Q99PP9 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.5□□□□□ -0.25
Trim16Q99PP9 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim16Q99PP9 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim16Q99PP9 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms