Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Msh4Q99MT2 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.47□□□□□ -0.25
Msh4Q99MT2 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Msh4Q99MT2 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Msh4Q99MT2 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.47□□□□□ -0.25
Msh4Q99MT2 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.47□□□□□ -0.25
Msh4Q99MT2 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Msh4Q99MT2 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.47□□□□□ -0.25
Msh4Q99MT2 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.47□□□□□ -0.25
Msh4Q99MT2 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Msh4Q99MT2 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Msh4Q99MT2 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.47□□□□□ -0.25
Msh4Q99MT2 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Msh4Q99MT2 BC001981-202ENSMUST00000191393 1545 ntBASIC13.47□□□□□ -0.25
Msh4Q99MT2 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Msh4Q99MT2 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Msh4Q99MT2 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Msh4Q99MT2 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Msh4Q99MT2 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Msh4Q99MT2 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Msh4Q99MT2 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Msh4Q99MT2 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Msh4Q99MT2 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Msh4Q99MT2 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.47□□□□□ -0.25
Msh4Q99MT2 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Msh4Q99MT2 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Msh4Q99MT2 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Msh4Q99MT2 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.47□□□□□ -0.25
Msh4Q99MT2 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Msh4Q99MT2 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Msh4Q99MT2 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Msh4Q99MT2 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.46□□□□□ -0.25
Msh4Q99MT2 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Msh4Q99MT2 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.46□□□□□ -0.25
Msh4Q99MT2 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Msh4Q99MT2 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Msh4Q99MT2 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Msh4Q99MT2 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Msh4Q99MT2 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Msh4Q99MT2 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Msh4Q99MT2 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Msh4Q99MT2 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.46□□□□□ -0.25
Msh4Q99MT2 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.46□□□□□ -0.25
Msh4Q99MT2 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Msh4Q99MT2 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Msh4Q99MT2 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Msh4Q99MT2 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.46□□□□□ -0.25
Msh4Q99MT2 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.46□□□□□ -0.25
Msh4Q99MT2 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Msh4Q99MT2 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Msh4Q99MT2 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Msh4Q99MT2 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Msh4Q99MT2 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Msh4Q99MT2 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Msh4Q99MT2 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Msh4Q99MT2 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Msh4Q99MT2 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Msh4Q99MT2 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Msh4Q99MT2 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Msh4Q99MT2 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Msh4Q99MT2 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Msh4Q99MT2 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Msh4Q99MT2 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Msh4Q99MT2 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Msh4Q99MT2 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Msh4Q99MT2 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Msh4Q99MT2 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Msh4Q99MT2 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Msh4Q99MT2 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Msh4Q99MT2 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Msh4Q99MT2 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Msh4Q99MT2 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Msh4Q99MT2 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.45□□□□□ -0.26
Msh4Q99MT2 Gm15487-201ENSMUST00000122373 465 ntBASIC13.45□□□□□ -0.26
Msh4Q99MT2 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Msh4Q99MT2 Mir6977-201ENSMUST00000184960 64 ntBASIC13.45□□□□□ -0.26
Msh4Q99MT2 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.45□□□□□ -0.26
Msh4Q99MT2 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.45□□□□□ -0.26
Msh4Q99MT2 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Msh4Q99MT2 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Msh4Q99MT2 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Msh4Q99MT2 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Msh4Q99MT2 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Msh4Q99MT2 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Msh4Q99MT2 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.45□□□□□ -0.26
Msh4Q99MT2 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Msh4Q99MT2 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Msh4Q99MT2 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Msh4Q99MT2 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Msh4Q99MT2 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Msh4Q99MT2 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Msh4Q99MT2 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Msh4Q99MT2 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Msh4Q99MT2 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Msh4Q99MT2 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Msh4Q99MT2 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.44□□□□□ -0.26
Msh4Q99MT2 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Msh4Q99MT2 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Msh4Q99MT2 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Msh4Q99MT2 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms