Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 AA619741-201ENSMUST00000195095 646 ntBASIC13.08□□□□□ -0.32
Chmp1b1Q99LU0 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.08□□□□□ -0.32
Chmp1b1Q99LU0 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.08□□□□□ -0.32
Chmp1b1Q99LU0 Gm45453-201ENSMUST00000211758 853 ntBASIC13.08□□□□□ -0.32
Chmp1b1Q99LU0 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp1b1Q99LU0 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Chmp1b1Q99LU0 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp1b1Q99LU0 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Chmp1b1Q99LU0 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp1b1Q99LU0 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp1b1Q99LU0 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp1b1Q99LU0 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Chmp1b1Q99LU0 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp1b1Q99LU0 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp1b1Q99LU0 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp1b1Q99LU0 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp1b1Q99LU0 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp1b1Q99LU0 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp1b1Q99LU0 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp1b1Q99LU0 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Chmp1b1Q99LU0 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp1b1Q99LU0 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp1b1Q99LU0 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp1b1Q99LU0 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp1b1Q99LU0 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp1b1Q99LU0 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.07□□□□□ -0.32
Chmp1b1Q99LU0 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Chmp1b1Q99LU0 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp1b1Q99LU0 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp1b1Q99LU0 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp1b1Q99LU0 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp1b1Q99LU0 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp1b1Q99LU0 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp1b1Q99LU0 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp1b1Q99LU0 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Chmp1b1Q99LU0 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Chmp1b1Q99LU0 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Chmp1b1Q99LU0 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.07□□□□□ -0.32
Chmp1b1Q99LU0 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Chmp1b1Q99LU0 Gm10576-201ENSMUST00000191927 825 ntBASIC13.07□□□□□ -0.32
Chmp1b1Q99LU0 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp1b1Q99LU0 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp1b1Q99LU0 Mir125a-201ENSMUST00000083545 68 ntBASIC13.07□□□□□ -0.32
Chmp1b1Q99LU0 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.07□□□□□ -0.32
Chmp1b1Q99LU0 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp1b1Q99LU0 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp1b1Q99LU0 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.07□□□□□ -0.32
Chmp1b1Q99LU0 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp1b1Q99LU0 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.07□□□□□ -0.32
Chmp1b1Q99LU0 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp1b1Q99LU0 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp1b1Q99LU0 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Chmp1b1Q99LU0 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp1b1Q99LU0 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp1b1Q99LU0 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp1b1Q99LU0 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Chmp1b1Q99LU0 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp1b1Q99LU0 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp1b1Q99LU0 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Chmp1b1Q99LU0 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp1b1Q99LU0 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.06□□□□□ -0.32
Chmp1b1Q99LU0 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp1b1Q99LU0 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp1b1Q99LU0 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp1b1Q99LU0 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp1b1Q99LU0 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.06□□□□□ -0.32
Chmp1b1Q99LU0 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp1b1Q99LU0 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp1b1Q99LU0 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp1b1Q99LU0 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp1b1Q99LU0 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp1b1Q99LU0 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp1b1Q99LU0 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.06□□□□□ -0.32
Chmp1b1Q99LU0 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.06□□□□□ -0.32
Chmp1b1Q99LU0 Gm27631-201ENSMUST00000184163 466 ntBASIC13.06□□□□□ -0.32
Chmp1b1Q99LU0 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp1b1Q99LU0 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp1b1Q99LU0 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.06□□□□□ -0.32
Chmp1b1Q99LU0 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.06□□□□□ -0.32
Chmp1b1Q99LU0 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp1b1Q99LU0 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp1b1Q99LU0 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Chmp1b1Q99LU0 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.06□□□□□ -0.32
Chmp1b1Q99LU0 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp1b1Q99LU0 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp1b1Q99LU0 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.06□□□□□ -0.32
Chmp1b1Q99LU0 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp1b1Q99LU0 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp1b1Q99LU0 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.06□□□□□ -0.32
Chmp1b1Q99LU0 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp1b1Q99LU0 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp1b1Q99LU0 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp1b1Q99LU0 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp1b1Q99LU0 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp1b1Q99LU0 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp1b1Q99LU0 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp1b1Q99LU0 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.05□□□□□ -0.32
Chmp1b1Q99LU0 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Chmp1b1Q99LU0 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.05□□□□□ -0.32
Chmp1b1Q99LU0 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms