Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdha3Q91Y16 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdha3Q91Y16 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdha3Q91Y16 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdha3Q91Y16 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdha3Q91Y16 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdha3Q91Y16 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdha3Q91Y16 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Pcdha3Q91Y16 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdha3Q91Y16 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Pcdha3Q91Y16 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha3Q91Y16 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Pcdha3Q91Y16 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Pcdha3Q91Y16 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Pcdha3Q91Y16 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha3Q91Y16 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Pcdha3Q91Y16 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha3Q91Y16 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Pcdha3Q91Y16 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha3Q91Y16 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha3Q91Y16 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha3Q91Y16 Gm5866-201ENSMUST00000177881 973 ntBASIC14.43□□□□□ -0.1
Pcdha3Q91Y16 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Pcdha3Q91Y16 Gm37714-201ENSMUST00000194742 342 ntBASIC14.43□□□□□ -0.1
Pcdha3Q91Y16 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha3Q91Y16 Gm7730-201ENSMUST00000212486 454 ntBASIC14.43□□□□□ -0.1
Pcdha3Q91Y16 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.43□□□□□ -0.1
Pcdha3Q91Y16 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha3Q91Y16 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.43□□□□□ -0.1
Pcdha3Q91Y16 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha3Q91Y16 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Pcdha3Q91Y16 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha3Q91Y16 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha3Q91Y16 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha3Q91Y16 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha3Q91Y16 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Pcdha3Q91Y16 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.43□□□□□ -0.1
Pcdha3Q91Y16 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha3Q91Y16 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha3Q91Y16 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha3Q91Y16 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha3Q91Y16 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha3Q91Y16 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha3Q91Y16 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.42□□□□□ -0.1
Pcdha3Q91Y16 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha3Q91Y16 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha3Q91Y16 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Pcdha3Q91Y16 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.42□□□□□ -0.1
Pcdha3Q91Y16 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha3Q91Y16 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha3Q91Y16 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.42□□□□□ -0.1
Pcdha3Q91Y16 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha3Q91Y16 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha3Q91Y16 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.42□□□□□ -0.1
Pcdha3Q91Y16 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha3Q91Y16 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.42□□□□□ -0.1
Pcdha3Q91Y16 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha3Q91Y16 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha3Q91Y16 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha3Q91Y16 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha3Q91Y16 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha3Q91Y16 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha3Q91Y16 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha3Q91Y16 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Pcdha3Q91Y16 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha3Q91Y16 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha3Q91Y16 Gm2445-201ENSMUST00000182798 989 ntBASIC14.42□□□□□ -0.1
Pcdha3Q91Y16 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.42□□□□□ -0.1
Pcdha3Q91Y16 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha3Q91Y16 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha3Q91Y16 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.42□□□□□ -0.1
Pcdha3Q91Y16 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha3Q91Y16 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha3Q91Y16 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha3Q91Y16 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha3Q91Y16 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.42□□□□□ -0.1
Pcdha3Q91Y16 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha3Q91Y16 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha3Q91Y16 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha3Q91Y16 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Pcdha3Q91Y16 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha3Q91Y16 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha3Q91Y16 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.41□□□□□ -0.1
Pcdha3Q91Y16 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha3Q91Y16 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha3Q91Y16 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha3Q91Y16 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha3Q91Y16 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha3Q91Y16 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha3Q91Y16 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha3Q91Y16 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Pcdha3Q91Y16 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.41□□□□□ -0.1
Pcdha3Q91Y16 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha3Q91Y16 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Pcdha3Q91Y16 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.41□□□□□ -0.1
Pcdha3Q91Y16 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha3Q91Y16 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha3Q91Y16 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha3Q91Y16 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha3Q91Y16 Gm29667-201ENSMUST00000190817 490 ntBASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms