Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pcdhga11Q91XY8 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga11Q91XY8 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga11Q91XY8 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga11Q91XY8 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga11Q91XY8 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga11Q91XY8 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga11Q91XY8 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga11Q91XY8 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga11Q91XY8 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga11Q91XY8 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga11Q91XY8 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Pcdhga11Q91XY8 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga11Q91XY8 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.38□□□□□ -0.27
Pcdhga11Q91XY8 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga11Q91XY8 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga11Q91XY8 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga11Q91XY8 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga11Q91XY8 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga11Q91XY8 Gm9719-201ENSMUST00000162765 543 ntBASIC13.38□□□□□ -0.27
Pcdhga11Q91XY8 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga11Q91XY8 Gm24158-201ENSMUST00000175263 71 ntBASIC13.38□□□□□ -0.27
Pcdhga11Q91XY8 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.38□□□□□ -0.27
Pcdhga11Q91XY8 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga11Q91XY8 Gm7774-201ENSMUST00000200064 533 ntBASIC13.38□□□□□ -0.27
Pcdhga11Q91XY8 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga11Q91XY8 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.38□□□□□ -0.27
Pcdhga11Q91XY8 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga11Q91XY8 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.38□□□□□ -0.27
Pcdhga11Q91XY8 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga11Q91XY8 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga11Q91XY8 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga11Q91XY8 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhga11Q91XY8 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga11Q91XY8 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga11Q91XY8 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga11Q91XY8 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga11Q91XY8 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga11Q91XY8 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga11Q91XY8 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.38□□□□□ -0.27
Pcdhga11Q91XY8 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga11Q91XY8 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga11Q91XY8 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga11Q91XY8 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 Mir449b-201ENSMUST00000104833 80 ntBASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 Gm25948-201ENSMUST00000175334 112 ntBASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 Gm10253-201ENSMUST00000194270 940 ntBASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 Mir125a-201ENSMUST00000083545 68 ntBASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.37□□□□□ -0.27
Pcdhga11Q91XY8 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga11Q91XY8 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Pcdhga11Q91XY8 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga11Q91XY8 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.36□□□□□ -0.27
Pcdhga11Q91XY8 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.36□□□□□ -0.27
Pcdhga11Q91XY8 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdhga11Q91XY8 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga11Q91XY8 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Pcdhga11Q91XY8 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga11Q91XY8 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga11Q91XY8 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Pcdhga11Q91XY8 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms