Protein–RNA interactions for Protein: Q91XD2

Lims2, LIM and senescent cell antigen-like-containing domain protein 2, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims2Q91XD2 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lims2Q91XD2 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Lims2Q91XD2 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lims2Q91XD2 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Lims2Q91XD2 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Lims2Q91XD2 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lims2Q91XD2 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Lims2Q91XD2 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.02□□□□□ -0.17
Lims2Q91XD2 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Lims2Q91XD2 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Lims2Q91XD2 Gm27892-201ENSMUST00000185017 106 ntBASIC14.02□□□□□ -0.17
Lims2Q91XD2 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.02□□□□□ -0.17
Lims2Q91XD2 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lims2Q91XD2 Gm10012-201ENSMUST00000078252 192 ntBASIC14.02□□□□□ -0.17
Lims2Q91XD2 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.02□□□□□ -0.17
Lims2Q91XD2 Gm26315-201ENSMUST00000083890 321 ntBASIC14.02□□□□□ -0.17
Lims2Q91XD2 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lims2Q91XD2 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lims2Q91XD2 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lims2Q91XD2 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lims2Q91XD2 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lims2Q91XD2 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Lims2Q91XD2 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.02□□□□□ -0.17
Lims2Q91XD2 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Lims2Q91XD2 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lims2Q91XD2 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lims2Q91XD2 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Lims2Q91XD2 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.02□□□□□ -0.17
Lims2Q91XD2 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Lims2Q91XD2 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lims2Q91XD2 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lims2Q91XD2 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lims2Q91XD2 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lims2Q91XD2 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lims2Q91XD2 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lims2Q91XD2 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lims2Q91XD2 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lims2Q91XD2 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Lims2Q91XD2 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lims2Q91XD2 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lims2Q91XD2 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lims2Q91XD2 Gm11478-201ENSMUST00000117851 599 ntBASIC14.01□□□□□ -0.17
Lims2Q91XD2 Gm13612-201ENSMUST00000119276 390 ntBASIC14.01□□□□□ -0.17
Lims2Q91XD2 Mir1894-201ENSMUST00000122802 81 ntBASIC14.01□□□□□ -0.17
Lims2Q91XD2 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lims2Q91XD2 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lims2Q91XD2 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.01□□□□□ -0.17
Lims2Q91XD2 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.01□□□□□ -0.17
Lims2Q91XD2 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Lims2Q91XD2 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lims2Q91XD2 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Lims2Q91XD2 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Lims2Q91XD2 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Lims2Q91XD2 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lims2Q91XD2 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lims2Q91XD2 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lims2Q91XD2 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lims2Q91XD2 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.01□□□□□ -0.17
Lims2Q91XD2 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lims2Q91XD2 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.01□□□□□ -0.17
Lims2Q91XD2 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lims2Q91XD2 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Lims2Q91XD2 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lims2Q91XD2 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lims2Q91XD2 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lims2Q91XD2 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Lims2Q91XD2 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lims2Q91XD2 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lims2Q91XD2 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lims2Q91XD2 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Lims2Q91XD2 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14□□□□□ -0.17
Lims2Q91XD2 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lims2Q91XD2 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14□□□□□ -0.17
Lims2Q91XD2 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Lims2Q91XD2 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Lims2Q91XD2 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lims2Q91XD2 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Lims2Q91XD2 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lims2Q91XD2 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lims2Q91XD2 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14□□□□□ -0.17
Lims2Q91XD2 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Lims2Q91XD2 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lims2Q91XD2 Gm11400-201ENSMUST00000120853 1214 ntBASIC14□□□□□ -0.17
Lims2Q91XD2 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14□□□□□ -0.17
Lims2Q91XD2 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lims2Q91XD2 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lims2Q91XD2 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14□□□□□ -0.17
Lims2Q91XD2 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14□□□□□ -0.17
Lims2Q91XD2 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14□□□□□ -0.17
Lims2Q91XD2 Gm17794-201ENSMUST00000220252 955 ntBASIC14□□□□□ -0.17
Lims2Q91XD2 AC130829.1-201ENSMUST00000221548 494 ntBASIC14□□□□□ -0.17
Lims2Q91XD2 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lims2Q91XD2 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lims2Q91XD2 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lims2Q91XD2 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lims2Q91XD2 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Lims2Q91XD2 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lims2Q91XD2 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Lims2Q91XD2 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lims2Q91XD2 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms