Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Gm9794-201ENSMUST00000202370 423 ntBASIC14.2□□□□□ -0.14
Usp3Q91W36 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp3Q91W36 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp3Q91W36 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp3Q91W36 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Usp3Q91W36 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.2□□□□□ -0.14
Usp3Q91W36 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp3Q91W36 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp3Q91W36 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp3Q91W36 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp3Q91W36 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Usp3Q91W36 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp3Q91W36 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Usp3Q91W36 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.2□□□□□ -0.14
Usp3Q91W36 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp3Q91W36 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Usp3Q91W36 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Usp3Q91W36 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp3Q91W36 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp3Q91W36 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp3Q91W36 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp3Q91W36 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp3Q91W36 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.19□□□□□ -0.14
Usp3Q91W36 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.19□□□□□ -0.14
Usp3Q91W36 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp3Q91W36 Gm11524-201ENSMUST00000119349 807 ntBASIC14.19□□□□□ -0.14
Usp3Q91W36 Gm23984-201ENSMUST00000157139 203 ntBASIC14.19□□□□□ -0.14
Usp3Q91W36 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Usp3Q91W36 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.19□□□□□ -0.14
Usp3Q91W36 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC14.19□□□□□ -0.14
Usp3Q91W36 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp3Q91W36 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.19□□□□□ -0.14
Usp3Q91W36 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Usp3Q91W36 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp3Q91W36 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp3Q91W36 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.19□□□□□ -0.14
Usp3Q91W36 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Usp3Q91W36 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp3Q91W36 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp3Q91W36 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp3Q91W36 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp3Q91W36 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp3Q91W36 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.19□□□□□ -0.14
Usp3Q91W36 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.19□□□□□ -0.14
Usp3Q91W36 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp3Q91W36 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp3Q91W36 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.19□□□□□ -0.14
Usp3Q91W36 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp3Q91W36 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.19□□□□□ -0.14
Usp3Q91W36 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp3Q91W36 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp3Q91W36 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Usp3Q91W36 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Usp3Q91W36 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp3Q91W36 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Usp3Q91W36 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Usp3Q91W36 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp3Q91W36 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp3Q91W36 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp3Q91W36 Gm37648-201ENSMUST00000192072 2563 ntBASIC14.18□□□□□ -0.14
Usp3Q91W36 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp3Q91W36 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp3Q91W36 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.18□□□□□ -0.14
Usp3Q91W36 Gm26464-201ENSMUST00000157094 305 ntBASIC14.18□□□□□ -0.14
Usp3Q91W36 Gm16107-201ENSMUST00000162523 862 ntBASIC14.18□□□□□ -0.14
Usp3Q91W36 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp3Q91W36 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.18□□□□□ -0.14
Usp3Q91W36 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp3Q91W36 Gm10046-201ENSMUST00000208208 632 ntTSL 2 BASIC14.18□□□□□ -0.14
Usp3Q91W36 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.18□□□□□ -0.14
Usp3Q91W36 Gm35638-201ENSMUST00000220724 652 ntBASIC14.18□□□□□ -0.14
Usp3Q91W36 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.18□□□□□ -0.14
Usp3Q91W36 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.18□□□□□ -0.14
Usp3Q91W36 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp3Q91W36 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp3Q91W36 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp3Q91W36 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.18□□□□□ -0.14
Usp3Q91W36 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp3Q91W36 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp3Q91W36 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp3Q91W36 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp3Q91W36 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Usp3Q91W36 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp3Q91W36 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp3Q91W36 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp3Q91W36 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp3Q91W36 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.17□□□□□ -0.14
Usp3Q91W36 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp3Q91W36 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp3Q91W36 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp3Q91W36 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp3Q91W36 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp3Q91W36 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp3Q91W36 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp3Q91W36 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp3Q91W36 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp3Q91W36 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.17□□□□□ -0.14
Usp3Q91W36 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp3Q91W36 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Usp3Q91W36 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms