Protein–RNA interactions for Protein: Q8VCD7

Kdm4c, Lysine-specific demethylase 4C, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm4cQ8VCD7 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Kdm4cQ8VCD7 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Kdm4cQ8VCD7 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Kdm4cQ8VCD7 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Kdm4cQ8VCD7 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Kdm4cQ8VCD7 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Kdm4cQ8VCD7 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Kdm4cQ8VCD7 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Kdm4cQ8VCD7 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Kdm4cQ8VCD7 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Kdm4cQ8VCD7 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Kdm4cQ8VCD7 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Kdm4cQ8VCD7 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Kdm4cQ8VCD7 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Kdm4cQ8VCD7 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Kdm4cQ8VCD7 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Kdm4cQ8VCD7 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Kdm4cQ8VCD7 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Kdm4cQ8VCD7 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Kdm4cQ8VCD7 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Kdm4cQ8VCD7 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Kdm4cQ8VCD7 Gm25287-201ENSMUST00000103846 110 ntBASIC16.21■□□□□ 0.19
Kdm4cQ8VCD7 Gm22918-201ENSMUST00000103855 110 ntBASIC16.21■□□□□ 0.19
Kdm4cQ8VCD7 Gm15678-201ENSMUST00000117573 960 ntBASIC16.21■□□□□ 0.19
Kdm4cQ8VCD7 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Kdm4cQ8VCD7 Gm12260-201ENSMUST00000122447 411 ntBASIC16.21■□□□□ 0.19
Kdm4cQ8VCD7 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Kdm4cQ8VCD7 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
Kdm4cQ8VCD7 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC16.21■□□□□ 0.19
Kdm4cQ8VCD7 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Kdm4cQ8VCD7 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Kdm4cQ8VCD7 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Kdm4cQ8VCD7 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.21■□□□□ 0.19
Kdm4cQ8VCD7 Dupd1-202ENSMUST00000224735 548 ntBASIC16.21■□□□□ 0.19
Kdm4cQ8VCD7 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Kdm4cQ8VCD7 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Kdm4cQ8VCD7 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Kdm4cQ8VCD7 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Kdm4cQ8VCD7 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Kdm4cQ8VCD7 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Kdm4cQ8VCD7 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Kdm4cQ8VCD7 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Kdm4cQ8VCD7 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Kdm4cQ8VCD7 AC168058.1-201ENSMUST00000219521 2282 ntBASIC16.21■□□□□ 0.19
Kdm4cQ8VCD7 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Kdm4cQ8VCD7 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Kdm4cQ8VCD7 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Kdm4cQ8VCD7 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Kdm4cQ8VCD7 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Kdm4cQ8VCD7 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Kdm4cQ8VCD7 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Kdm4cQ8VCD7 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Kdm4cQ8VCD7 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Kdm4cQ8VCD7 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Kdm4cQ8VCD7 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Kdm4cQ8VCD7 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Kdm4cQ8VCD7 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Kdm4cQ8VCD7 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Kdm4cQ8VCD7 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Kdm4cQ8VCD7 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Kdm4cQ8VCD7 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Kdm4cQ8VCD7 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Kdm4cQ8VCD7 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Kdm4cQ8VCD7 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Kdm4cQ8VCD7 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.2■□□□□ 0.18
Kdm4cQ8VCD7 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Kdm4cQ8VCD7 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Kdm4cQ8VCD7 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Kdm4cQ8VCD7 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Kdm4cQ8VCD7 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.2■□□□□ 0.18
Kdm4cQ8VCD7 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Kdm4cQ8VCD7 Gm18889-201ENSMUST00000174284 929 ntBASIC16.2■□□□□ 0.18
Kdm4cQ8VCD7 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.2■□□□□ 0.18
Kdm4cQ8VCD7 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Kdm4cQ8VCD7 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Kdm4cQ8VCD7 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Kdm4cQ8VCD7 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Kdm4cQ8VCD7 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Kdm4cQ8VCD7 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Kdm4cQ8VCD7 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.2■□□□□ 0.18
Kdm4cQ8VCD7 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Kdm4cQ8VCD7 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Kdm4cQ8VCD7 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Kdm4cQ8VCD7 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Kdm4cQ8VCD7 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Kdm4cQ8VCD7 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Kdm4cQ8VCD7 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Kdm4cQ8VCD7 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
Kdm4cQ8VCD7 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Kdm4cQ8VCD7 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Kdm4cQ8VCD7 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Kdm4cQ8VCD7 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC16.2■□□□□ 0.18
Kdm4cQ8VCD7 AC124751.1-201ENSMUST00000222716 1408 ntBASIC16.19■□□□□ 0.18
Kdm4cQ8VCD7 Ksr1-207ENSMUST00000226282 5260 ntBASIC16.19■□□□□ 0.18
Kdm4cQ8VCD7 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Kdm4cQ8VCD7 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Kdm4cQ8VCD7 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Kdm4cQ8VCD7 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Kdm4cQ8VCD7 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Kdm4cQ8VCD7 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms