Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ndc1Q8VCB1 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ndc1Q8VCB1 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ndc1Q8VCB1 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.04□□□□□ -0.32
Ndc1Q8VCB1 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ndc1Q8VCB1 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.04□□□□□ -0.32
Ndc1Q8VCB1 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ndc1Q8VCB1 Gm45384-201ENSMUST00000210451 277 ntBASIC13.04□□□□□ -0.32
Ndc1Q8VCB1 Gm17795-201ENSMUST00000214505 757 ntBASIC13.04□□□□□ -0.32
Ndc1Q8VCB1 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ndc1Q8VCB1 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ndc1Q8VCB1 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Ndc1Q8VCB1 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.04□□□□□ -0.32
Ndc1Q8VCB1 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ndc1Q8VCB1 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.04□□□□□ -0.32
Ndc1Q8VCB1 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Ndc1Q8VCB1 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ndc1Q8VCB1 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ndc1Q8VCB1 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ndc1Q8VCB1 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
Ndc1Q8VCB1 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ndc1Q8VCB1 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ndc1Q8VCB1 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ndc1Q8VCB1 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ndc1Q8VCB1 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ndc1Q8VCB1 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ndc1Q8VCB1 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ndc1Q8VCB1 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.04□□□□□ -0.32
Ndc1Q8VCB1 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.04□□□□□ -0.32
Ndc1Q8VCB1 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.04□□□□□ -0.32
Ndc1Q8VCB1 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.04□□□□□ -0.32
Ndc1Q8VCB1 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ndc1Q8VCB1 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ndc1Q8VCB1 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.04□□□□□ -0.32
Ndc1Q8VCB1 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ndc1Q8VCB1 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ndc1Q8VCB1 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ndc1Q8VCB1 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Ndc1Q8VCB1 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ndc1Q8VCB1 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ndc1Q8VCB1 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ndc1Q8VCB1 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Ndc1Q8VCB1 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ndc1Q8VCB1 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ndc1Q8VCB1 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
Ndc1Q8VCB1 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.03□□□□□ -0.32
Ndc1Q8VCB1 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.03□□□□□ -0.32
Ndc1Q8VCB1 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ndc1Q8VCB1 Gm5354-201ENSMUST00000182417 973 ntBASIC13.03□□□□□ -0.32
Ndc1Q8VCB1 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Ndc1Q8VCB1 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ndc1Q8VCB1 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ndc1Q8VCB1 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.03□□□□□ -0.32
Ndc1Q8VCB1 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ndc1Q8VCB1 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.03□□□□□ -0.32
Ndc1Q8VCB1 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.03□□□□□ -0.32
Ndc1Q8VCB1 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.03□□□□□ -0.32
Ndc1Q8VCB1 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ndc1Q8VCB1 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ndc1Q8VCB1 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ndc1Q8VCB1 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.03□□□□□ -0.32
Ndc1Q8VCB1 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ndc1Q8VCB1 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ndc1Q8VCB1 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ndc1Q8VCB1 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ndc1Q8VCB1 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Ndc1Q8VCB1 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Ndc1Q8VCB1 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ndc1Q8VCB1 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ndc1Q8VCB1 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ndc1Q8VCB1 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ndc1Q8VCB1 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ndc1Q8VCB1 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ndc1Q8VCB1 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ndc1Q8VCB1 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ndc1Q8VCB1 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ndc1Q8VCB1 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ndc1Q8VCB1 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.02□□□□□ -0.32
Ndc1Q8VCB1 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Ndc1Q8VCB1 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ndc1Q8VCB1 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ndc1Q8VCB1 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ndc1Q8VCB1 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ndc1Q8VCB1 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Ndc1Q8VCB1 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.02□□□□□ -0.33
Ndc1Q8VCB1 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ndc1Q8VCB1 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ndc1Q8VCB1 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ndc1Q8VCB1 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ndc1Q8VCB1 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.02□□□□□ -0.33
Ndc1Q8VCB1 Gm5425-201ENSMUST00000214125 459 ntBASIC13.02□□□□□ -0.33
Ndc1Q8VCB1 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.02□□□□□ -0.33
Ndc1Q8VCB1 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ndc1Q8VCB1 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ndc1Q8VCB1 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ndc1Q8VCB1 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.02□□□□□ -0.33
Ndc1Q8VCB1 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ndc1Q8VCB1 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Ndc1Q8VCB1 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ndc1Q8VCB1 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms