Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Lsm1Q8VC85 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm1Q8VC85 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm1Q8VC85 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm1Q8VC85 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Lsm1Q8VC85 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm1Q8VC85 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm1Q8VC85 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Lsm1Q8VC85 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm1Q8VC85 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm1Q8VC85 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm1Q8VC85 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm1Q8VC85 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm1Q8VC85 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Lsm1Q8VC85 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm1Q8VC85 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm1Q8VC85 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm1Q8VC85 Gm24543-201ENSMUST00000103867 82 ntBASIC13.25□□□□□ -0.29
Lsm1Q8VC85 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Lsm1Q8VC85 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.25□□□□□ -0.29
Lsm1Q8VC85 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.25□□□□□ -0.29
Lsm1Q8VC85 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm1Q8VC85 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm1Q8VC85 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm1Q8VC85 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm1Q8VC85 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm1Q8VC85 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm1Q8VC85 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm1Q8VC85 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.25□□□□□ -0.29
Lsm1Q8VC85 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm1Q8VC85 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm1Q8VC85 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.25□□□□□ -0.29
Lsm1Q8VC85 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm1Q8VC85 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm1Q8VC85 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm1Q8VC85 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm1Q8VC85 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm1Q8VC85 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm1Q8VC85 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm1Q8VC85 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm1Q8VC85 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm1Q8VC85 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Lsm1Q8VC85 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm1Q8VC85 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm1Q8VC85 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm1Q8VC85 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm1Q8VC85 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm1Q8VC85 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Lsm1Q8VC85 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm1Q8VC85 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm1Q8VC85 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.24□□□□□ -0.29
Lsm1Q8VC85 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm1Q8VC85 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.24□□□□□ -0.29
Lsm1Q8VC85 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm1Q8VC85 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.24□□□□□ -0.29
Lsm1Q8VC85 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm1Q8VC85 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.24□□□□□ -0.29
Lsm1Q8VC85 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm1Q8VC85 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm1Q8VC85 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm1Q8VC85 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Lsm1Q8VC85 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm1Q8VC85 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.24□□□□□ -0.29
Lsm1Q8VC85 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm1Q8VC85 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm1Q8VC85 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Lsm1Q8VC85 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm1Q8VC85 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.24□□□□□ -0.29
Lsm1Q8VC85 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm1Q8VC85 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm1Q8VC85 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm1Q8VC85 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm1Q8VC85 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.24□□□□□ -0.29
Lsm1Q8VC85 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm1Q8VC85 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm1Q8VC85 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lsm1Q8VC85 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lsm1Q8VC85 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lsm1Q8VC85 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lsm1Q8VC85 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.23□□□□□ -0.29
Lsm1Q8VC85 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Lsm1Q8VC85 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lsm1Q8VC85 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lsm1Q8VC85 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lsm1Q8VC85 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lsm1Q8VC85 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Lsm1Q8VC85 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lsm1Q8VC85 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lsm1Q8VC85 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Lsm1Q8VC85 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lsm1Q8VC85 Gm11594-201ENSMUST00000122313 162 ntBASIC13.23□□□□□ -0.29
Lsm1Q8VC85 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.23□□□□□ -0.29
Lsm1Q8VC85 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lsm1Q8VC85 Gm25925-201ENSMUST00000158314 306 ntBASIC13.23□□□□□ -0.29
Lsm1Q8VC85 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.23□□□□□ -0.29
Lsm1Q8VC85 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Lsm1Q8VC85 Gm28630-201ENSMUST00000187806 498 ntBASIC13.23□□□□□ -0.29
Lsm1Q8VC85 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.23□□□□□ -0.29
Lsm1Q8VC85 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.23□□□□□ -0.29
Lsm1Q8VC85 Gm10253-201ENSMUST00000194270 940 ntBASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms