Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Rnf8Q8VC56 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf8Q8VC56 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Rnf8Q8VC56 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf8Q8VC56 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.34□□□□□ -0.27
Rnf8Q8VC56 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Rnf8Q8VC56 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.34□□□□□ -0.27
Rnf8Q8VC56 Gm15693-201ENSMUST00000120470 637 ntBASIC13.34□□□□□ -0.27
Rnf8Q8VC56 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf8Q8VC56 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf8Q8VC56 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf8Q8VC56 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.34□□□□□ -0.27
Rnf8Q8VC56 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Rnf8Q8VC56 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.34□□□□□ -0.27
Rnf8Q8VC56 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.34□□□□□ -0.27
Rnf8Q8VC56 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf8Q8VC56 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.34□□□□□ -0.27
Rnf8Q8VC56 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf8Q8VC56 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.34□□□□□ -0.27
Rnf8Q8VC56 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf8Q8VC56 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf8Q8VC56 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf8Q8VC56 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf8Q8VC56 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf8Q8VC56 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rnf8Q8VC56 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf8Q8VC56 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf8Q8VC56 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.34□□□□□ -0.27
Rnf8Q8VC56 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf8Q8VC56 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf8Q8VC56 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rnf8Q8VC56 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rnf8Q8VC56 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Rnf8Q8VC56 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rnf8Q8VC56 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rnf8Q8VC56 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf8Q8VC56 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf8Q8VC56 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf8Q8VC56 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf8Q8VC56 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf8Q8VC56 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.33□□□□□ -0.28
Rnf8Q8VC56 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.33□□□□□ -0.28
Rnf8Q8VC56 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf8Q8VC56 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf8Q8VC56 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Rnf8Q8VC56 Gm8584-201ENSMUST00000171982 758 ntBASIC13.33□□□□□ -0.28
Rnf8Q8VC56 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf8Q8VC56 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.33□□□□□ -0.28
Rnf8Q8VC56 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf8Q8VC56 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf8Q8VC56 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.33□□□□□ -0.28
Rnf8Q8VC56 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.33□□□□□ -0.28
Rnf8Q8VC56 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf8Q8VC56 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Rnf8Q8VC56 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf8Q8VC56 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf8Q8VC56 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf8Q8VC56 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf8Q8VC56 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.33□□□□□ -0.28
Rnf8Q8VC56 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.33□□□□□ -0.28
Rnf8Q8VC56 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rnf8Q8VC56 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf8Q8VC56 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf8Q8VC56 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf8Q8VC56 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf8Q8VC56 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf8Q8VC56 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf8Q8VC56 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf8Q8VC56 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
Rnf8Q8VC56 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf8Q8VC56 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf8Q8VC56 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf8Q8VC56 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf8Q8VC56 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.32□□□□□ -0.28
Rnf8Q8VC56 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf8Q8VC56 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf8Q8VC56 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Rnf8Q8VC56 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf8Q8VC56 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
Rnf8Q8VC56 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.32□□□□□ -0.28
Rnf8Q8VC56 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.32□□□□□ -0.28
Rnf8Q8VC56 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf8Q8VC56 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf8Q8VC56 Gm13616-201ENSMUST00000120600 222 ntBASIC13.32□□□□□ -0.28
Rnf8Q8VC56 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Rnf8Q8VC56 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf8Q8VC56 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf8Q8VC56 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf8Q8VC56 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf8Q8VC56 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rnf8Q8VC56 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf8Q8VC56 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf8Q8VC56 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf8Q8VC56 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf8Q8VC56 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rnf8Q8VC56 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rnf8Q8VC56 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf8Q8VC56 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Rnf8Q8VC56 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf8Q8VC56 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms