Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Chmp7Q8R1T1 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC17.58■□□□□ 0.4
Chmp7Q8R1T1 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp7Q8R1T1 Gm38144-201ENSMUST00000192790 465 ntBASIC17.58■□□□□ 0.4
Chmp7Q8R1T1 Gm29705-201ENSMUST00000212598 474 ntBASIC17.58■□□□□ 0.4
Chmp7Q8R1T1 AC159896.2-201ENSMUST00000214753 269 ntBASIC17.58■□□□□ 0.4
Chmp7Q8R1T1 AC154319.1-201ENSMUST00000216330 312 ntBASIC17.58■□□□□ 0.4
Chmp7Q8R1T1 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC17.58■□□□□ 0.4
Chmp7Q8R1T1 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC17.58■□□□□ 0.4
Chmp7Q8R1T1 AL589735.1-201ENSMUST00000224353 270 ntBASIC17.58■□□□□ 0.4
Chmp7Q8R1T1 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp7Q8R1T1 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp7Q8R1T1 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp7Q8R1T1 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Chmp7Q8R1T1 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp7Q8R1T1 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Chmp7Q8R1T1 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp7Q8R1T1 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp7Q8R1T1 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp7Q8R1T1 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
Chmp7Q8R1T1 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp7Q8R1T1 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp7Q8R1T1 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp7Q8R1T1 Mmp14-206ENSMUST00000225641 3238 ntBASIC17.57■□□□□ 0.4
Chmp7Q8R1T1 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp7Q8R1T1 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp7Q8R1T1 Gm42853-201ENSMUST00000201273 1387 ntBASIC17.57■□□□□ 0.4
Chmp7Q8R1T1 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Chmp7Q8R1T1 Gm5187-201ENSMUST00000117317 991 ntBASIC17.57■□□□□ 0.4
Chmp7Q8R1T1 Gm27514-201ENSMUST00000183692 110 ntBASIC17.57■□□□□ 0.4
Chmp7Q8R1T1 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp7Q8R1T1 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp7Q8R1T1 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp7Q8R1T1 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp7Q8R1T1 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp7Q8R1T1 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Chmp7Q8R1T1 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Chmp7Q8R1T1 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp7Q8R1T1 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp7Q8R1T1 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp7Q8R1T1 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp7Q8R1T1 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp7Q8R1T1 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Chmp7Q8R1T1 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Chmp7Q8R1T1 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Chmp7Q8R1T1 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.57■□□□□ 0.4
Chmp7Q8R1T1 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp7Q8R1T1 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp7Q8R1T1 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp7Q8R1T1 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Chmp7Q8R1T1 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp7Q8R1T1 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp7Q8R1T1 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp7Q8R1T1 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp7Q8R1T1 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC17.56■□□□□ 0.4
Chmp7Q8R1T1 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Chmp7Q8R1T1 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Chmp7Q8R1T1 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.56■□□□□ 0.4
Chmp7Q8R1T1 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC17.56■□□□□ 0.4
Chmp7Q8R1T1 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Chmp7Q8R1T1 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp7Q8R1T1 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC17.56■□□□□ 0.4
Chmp7Q8R1T1 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp7Q8R1T1 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Chmp7Q8R1T1 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC17.56■□□□□ 0.4
Chmp7Q8R1T1 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC17.56■□□□□ 0.4
Chmp7Q8R1T1 Rn7sk-201ENSMUST00000083103 331 ntBASIC17.56■□□□□ 0.4
Chmp7Q8R1T1 Gm26315-201ENSMUST00000083890 321 ntBASIC17.56■□□□□ 0.4
Chmp7Q8R1T1 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Chmp7Q8R1T1 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp7Q8R1T1 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Chmp7Q8R1T1 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp7Q8R1T1 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp7Q8R1T1 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Chmp7Q8R1T1 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp7Q8R1T1 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp7Q8R1T1 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp7Q8R1T1 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp7Q8R1T1 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp7Q8R1T1 Gm12020-201ENSMUST00000119030 2042 ntBASIC17.55■□□□□ 0.4
Chmp7Q8R1T1 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.55■□□□□ 0.4
Chmp7Q8R1T1 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp7Q8R1T1 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp7Q8R1T1 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp7Q8R1T1 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp7Q8R1T1 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC17.55■□□□□ 0.4
Chmp7Q8R1T1 Gm11661-201ENSMUST00000121761 1327 ntBASIC17.55■□□□□ 0.4
Chmp7Q8R1T1 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Chmp7Q8R1T1 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp7Q8R1T1 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp7Q8R1T1 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp7Q8R1T1 Gm23931-201ENSMUST00000103842 109 ntBASIC17.55■□□□□ 0.4
Chmp7Q8R1T1 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp7Q8R1T1 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC17.55■□□□□ 0.4
Chmp7Q8R1T1 Gm15198-201ENSMUST00000117283 177 ntBASIC17.55■□□□□ 0.4
Chmp7Q8R1T1 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp7Q8R1T1 Gm12203-201ENSMUST00000118235 598 ntBASIC17.55■□□□□ 0.4
Chmp7Q8R1T1 Gm12209-201ENSMUST00000120089 596 ntBASIC17.55■□□□□ 0.4
Chmp7Q8R1T1 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp7Q8R1T1 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms