Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3a1Q8K4Z5 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3a1Q8K4Z5 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3a1Q8K4Z5 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3a1Q8K4Z5 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3a1Q8K4Z5 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3a1Q8K4Z5 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3a1Q8K4Z5 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sf3a1Q8K4Z5 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sf3a1Q8K4Z5 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sf3a1Q8K4Z5 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sf3a1Q8K4Z5 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Sf3a1Q8K4Z5 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sf3a1Q8K4Z5 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sf3a1Q8K4Z5 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sf3a1Q8K4Z5 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sf3a1Q8K4Z5 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC16.89■□□□□ 0.29
Sf3a1Q8K4Z5 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sf3a1Q8K4Z5 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sf3a1Q8K4Z5 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC16.89■□□□□ 0.29
Sf3a1Q8K4Z5 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Sf3a1Q8K4Z5 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sf3a1Q8K4Z5 Gm2423-201ENSMUST00000074863 733 ntBASIC16.89■□□□□ 0.29
Sf3a1Q8K4Z5 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC16.89■□□□□ 0.29
Sf3a1Q8K4Z5 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sf3a1Q8K4Z5 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sf3a1Q8K4Z5 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC16.89■□□□□ 0.29
Sf3a1Q8K4Z5 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sf3a1Q8K4Z5 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sf3a1Q8K4Z5 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Sf3a1Q8K4Z5 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Sf3a1Q8K4Z5 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sf3a1Q8K4Z5 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sf3a1Q8K4Z5 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sf3a1Q8K4Z5 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sf3a1Q8K4Z5 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sf3a1Q8K4Z5 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sf3a1Q8K4Z5 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 Zkscan14-203ENSMUST00000198959 2243 ntBASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 Gm43056-201ENSMUST00000197865 2791 ntBASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 Gm24420-201ENSMUST00000176676 59 ntBASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 Gm42612-201ENSMUST00000197986 623 ntBASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 Gm43170-201ENSMUST00000199827 612 ntBASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 Gm17795-201ENSMUST00000214505 757 ntBASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 Gm6218-201ENSMUST00000219812 628 ntBASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sf3a1Q8K4Z5 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sf3a1Q8K4Z5 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sf3a1Q8K4Z5 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sf3a1Q8K4Z5 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sf3a1Q8K4Z5 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sf3a1Q8K4Z5 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC16.87■□□□□ 0.29
Sf3a1Q8K4Z5 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC16.87■□□□□ 0.29
Sf3a1Q8K4Z5 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sf3a1Q8K4Z5 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC16.87■□□□□ 0.29
Sf3a1Q8K4Z5 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sf3a1Q8K4Z5 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.87■□□□□ 0.29
Sf3a1Q8K4Z5 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC16.87■□□□□ 0.29
Sf3a1Q8K4Z5 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC16.87■□□□□ 0.29
Sf3a1Q8K4Z5 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sf3a1Q8K4Z5 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.87■□□□□ 0.29
Sf3a1Q8K4Z5 Gm18905-201ENSMUST00000205454 928 ntBASIC16.87■□□□□ 0.29
Sf3a1Q8K4Z5 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms