Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col23a1Q8K4G2 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col23a1Q8K4G2 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC16.54■□□□□ 0.24
Col23a1Q8K4G2 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col23a1Q8K4G2 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col23a1Q8K4G2 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col23a1Q8K4G2 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col23a1Q8K4G2 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col23a1Q8K4G2 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC16.54■□□□□ 0.24
Col23a1Q8K4G2 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col23a1Q8K4G2 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col23a1Q8K4G2 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col23a1Q8K4G2 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC16.54■□□□□ 0.24
Col23a1Q8K4G2 Gm8546-201ENSMUST00000178288 1264 ntBASIC16.54■□□□□ 0.24
Col23a1Q8K4G2 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Col23a1Q8K4G2 Gm44100-201ENSMUST00000204329 436 ntBASIC16.54■□□□□ 0.24
Col23a1Q8K4G2 Gm19963-201ENSMUST00000208413 1255 ntBASIC16.54■□□□□ 0.24
Col23a1Q8K4G2 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Col23a1Q8K4G2 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col23a1Q8K4G2 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col23a1Q8K4G2 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col23a1Q8K4G2 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col23a1Q8K4G2 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC16.54■□□□□ 0.24
Col23a1Q8K4G2 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
Col23a1Q8K4G2 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col23a1Q8K4G2 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col23a1Q8K4G2 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC16.53■□□□□ 0.24
Col23a1Q8K4G2 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col23a1Q8K4G2 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col23a1Q8K4G2 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col23a1Q8K4G2 Efs-202ENSMUST00000227037 2540 ntBASIC16.53■□□□□ 0.24
Col23a1Q8K4G2 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col23a1Q8K4G2 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC16.53■□□□□ 0.24
Col23a1Q8K4G2 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col23a1Q8K4G2 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC16.53■□□□□ 0.24
Col23a1Q8K4G2 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col23a1Q8K4G2 Mir1943-201ENSMUST00000158276 73 ntBASIC16.53■□□□□ 0.24
Col23a1Q8K4G2 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Col23a1Q8K4G2 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Col23a1Q8K4G2 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC16.53■□□□□ 0.24
Col23a1Q8K4G2 Gm43378-201ENSMUST00000199336 582 ntBASIC16.53■□□□□ 0.24
Col23a1Q8K4G2 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC16.53■□□□□ 0.24
Col23a1Q8K4G2 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC16.53■□□□□ 0.24
Col23a1Q8K4G2 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col23a1Q8K4G2 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col23a1Q8K4G2 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col23a1Q8K4G2 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col23a1Q8K4G2 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col23a1Q8K4G2 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Col23a1Q8K4G2 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col23a1Q8K4G2 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col23a1Q8K4G2 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC16.53■□□□□ 0.24
Col23a1Q8K4G2 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col23a1Q8K4G2 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Col23a1Q8K4G2 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col23a1Q8K4G2 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col23a1Q8K4G2 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col23a1Q8K4G2 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col23a1Q8K4G2 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Col23a1Q8K4G2 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Col23a1Q8K4G2 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col23a1Q8K4G2 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col23a1Q8K4G2 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.24
Col23a1Q8K4G2 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC16.52■□□□□ 0.24
Col23a1Q8K4G2 Gm4760-201ENSMUST00000119663 1030 ntBASIC16.52■□□□□ 0.24
Col23a1Q8K4G2 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC16.52■□□□□ 0.24
Col23a1Q8K4G2 n-R5s14-201ENSMUST00000122688 107 ntBASIC16.52■□□□□ 0.24
Col23a1Q8K4G2 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Col23a1Q8K4G2 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC16.52■□□□□ 0.24
Col23a1Q8K4G2 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col23a1Q8K4G2 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC16.52■□□□□ 0.24
Col23a1Q8K4G2 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Col23a1Q8K4G2 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC16.52■□□□□ 0.24
Col23a1Q8K4G2 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC16.52■□□□□ 0.24
Col23a1Q8K4G2 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col23a1Q8K4G2 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Col23a1Q8K4G2 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col23a1Q8K4G2 Gm10702-201ENSMUST00000098929 1268 ntBASIC16.52■□□□□ 0.24
Col23a1Q8K4G2 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.52■□□□□ 0.24
Col23a1Q8K4G2 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col23a1Q8K4G2 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.52■□□□□ 0.24
Col23a1Q8K4G2 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col23a1Q8K4G2 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Col23a1Q8K4G2 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
Col23a1Q8K4G2 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
Col23a1Q8K4G2 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col23a1Q8K4G2 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
Col23a1Q8K4G2 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col23a1Q8K4G2 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Col23a1Q8K4G2 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Col23a1Q8K4G2 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC16.51■□□□□ 0.23
Col23a1Q8K4G2 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col23a1Q8K4G2 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col23a1Q8K4G2 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col23a1Q8K4G2 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col23a1Q8K4G2 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Col23a1Q8K4G2 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col23a1Q8K4G2 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC16.51■□□□□ 0.23
Col23a1Q8K4G2 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col23a1Q8K4G2 Gm11531-201ENSMUST00000117614 555 ntBASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms