Protein–RNA interactions for Protein: Q8K389

Cdk5rap2, CDK5 regulatory subunit-associated protein 2, mousemouse

Predictions only

Length 1,822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap2Q8K389 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cdk5rap2Q8K389 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdk5rap2Q8K389 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdk5rap2Q8K389 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdk5rap2Q8K389 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Cdk5rap2Q8K389 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdk5rap2Q8K389 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdk5rap2Q8K389 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdk5rap2Q8K389 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cdk5rap2Q8K389 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk5rap2Q8K389 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk5rap2Q8K389 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk5rap2Q8K389 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk5rap2Q8K389 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk5rap2Q8K389 Gm2231-201ENSMUST00000125661 612 ntBASIC18.37■□□□□ 0.53
Cdk5rap2Q8K389 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Cdk5rap2Q8K389 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Cdk5rap2Q8K389 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk5rap2Q8K389 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk5rap2Q8K389 Sorbs3-204ENSMUST00000227929 2460 ntBASIC18.37■□□□□ 0.53
Cdk5rap2Q8K389 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC18.37■□□□□ 0.53
Cdk5rap2Q8K389 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk5rap2Q8K389 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Cdk5rap2Q8K389 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk5rap2Q8K389 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk5rap2Q8K389 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.37■□□□□ 0.53
Cdk5rap2Q8K389 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk5rap2Q8K389 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC18.37■□□□□ 0.53
Cdk5rap2Q8K389 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk5rap2Q8K389 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Cdk5rap2Q8K389 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk5rap2Q8K389 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Cdk5rap2Q8K389 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk5rap2Q8K389 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk5rap2Q8K389 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Cdk5rap2Q8K389 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Cdk5rap2Q8K389 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Cdk5rap2Q8K389 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Cdk5rap2Q8K389 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Cdk5rap2Q8K389 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Cdk5rap2Q8K389 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Cdk5rap2Q8K389 Gm5637-201ENSMUST00000153890 1119 ntBASIC18.37■□□□□ 0.53
Cdk5rap2Q8K389 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC18.37■□□□□ 0.53
Cdk5rap2Q8K389 Gm42627-201ENSMUST00000197347 224 ntBASIC18.37■□□□□ 0.53
Cdk5rap2Q8K389 Gm44772-201ENSMUST00000207623 1191 ntBASIC18.37■□□□□ 0.53
Cdk5rap2Q8K389 Gm6458-201ENSMUST00000211573 635 ntBASIC18.37■□□□□ 0.53
Cdk5rap2Q8K389 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk5rap2Q8K389 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk5rap2Q8K389 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk5rap2Q8K389 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk5rap2Q8K389 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk5rap2Q8K389 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk5rap2Q8K389 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdk5rap2Q8K389 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdk5rap2Q8K389 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdk5rap2Q8K389 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdk5rap2Q8K389 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cdk5rap2Q8K389 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdk5rap2Q8K389 Gm24526-201ENSMUST00000082921 158 ntBASIC18.36■□□□□ 0.53
Cdk5rap2Q8K389 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Cdk5rap2Q8K389 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdk5rap2Q8K389 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdk5rap2Q8K389 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC18.36■□□□□ 0.53
Cdk5rap2Q8K389 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdk5rap2Q8K389 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdk5rap2Q8K389 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cdk5rap2Q8K389 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdk5rap2Q8K389 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Cdk5rap2Q8K389 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk5rap2Q8K389 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk5rap2Q8K389 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC18.35■□□□□ 0.53
Cdk5rap2Q8K389 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk5rap2Q8K389 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk5rap2Q8K389 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk5rap2Q8K389 Gm19163-201ENSMUST00000223313 780 ntBASIC18.35■□□□□ 0.53
Cdk5rap2Q8K389 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk5rap2Q8K389 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk5rap2Q8K389 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk5rap2Q8K389 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk5rap2Q8K389 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Cdk5rap2Q8K389 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk5rap2Q8K389 AC159649.2-201ENSMUST00000222984 3223 ntBASIC18.35■□□□□ 0.53
Cdk5rap2Q8K389 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk5rap2Q8K389 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk5rap2Q8K389 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk5rap2Q8K389 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk5rap2Q8K389 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk5rap2Q8K389 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC18.35■□□□□ 0.53
Cdk5rap2Q8K389 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk5rap2Q8K389 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk5rap2Q8K389 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk5rap2Q8K389 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
Cdk5rap2Q8K389 Gm14704-201ENSMUST00000120300 874 ntBASIC18.35■□□□□ 0.53
Cdk5rap2Q8K389 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk5rap2Q8K389 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC18.35■□□□□ 0.53
Cdk5rap2Q8K389 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC18.35■□□□□ 0.53
Cdk5rap2Q8K389 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk5rap2Q8K389 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdk5rap2Q8K389 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cdk5rap2Q8K389 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms